RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 SRP54P61011 504 aaKnown RBP13.66□□□□□ -0.22
CD9-208ENST00000538834 CDK3Q00526 305 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 PPARDQ03181 441 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 RPS6KA1Q15418 735 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 SLC1A5Q15758 541 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 SIRPB2Q5JXA9 342 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 DENND5AQ6IQ26 1287 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 DRICH1Q6PGQ1 229 aaPredicted RBP13.66□□□□□ -0.22
CD9-208ENST00000538834 LVRNQ6Q4G3 990 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 LYSMD3Q7Z3D4 306 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 HEATR4Q86WZ0 1026 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 CACTIN-AS1Q8N1I8 211 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 OR56A4Q8NGH8 313 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 TSACCQ96A04 125 aaPredicted RBP13.66□□□□□ -0.22
CD9-208ENST00000538834 AP2M1Q96CW1 435 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 PDXPQ96GD0 296 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 CNDP2Q96KP4 475 aaKnown RBP13.66□□□□□ -0.22
CD9-208ENST00000538834 C19orf43Q9BQ61 176 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 DUSP23Q9BVJ7 150 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 CDH19Q9H159 772 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 TRABDQ9H4I3 376 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 WDR26Q9H7D7 661 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 ZFYVE1Q9HBF4 777 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 UBP1Q9NZI7 540 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 KLHL8Q9P2G9 620 aaPredicted RBP13.66□□□□□ -0.22
CD9-208ENST00000538834 SPASTQ9UBP0 616 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 FTSJ1Q9UET6 329 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 APOBEC3BQ9UH17 382 aaKnown RBP13.66□□□□□ -0.22
CD9-208ENST00000538834 APOBEC2Q9Y235 224 aaKnown RBP13.66□□□□□ -0.22
CD9-208ENST00000538834 ZNF711Q9Y462 761 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 ST14Q9Y5Y6 855 aa13.66□□□□□ -0.22
CD9-208ENST00000538834 FREM2Q5SZK8 3169 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 C1orf232A0A0U1RR37 186 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 GOLGA6L9A6NEM1 432 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 NEMP2A6NFY4 417 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 FADS2P1A8MWK0 482 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 H3BM21 787 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 PDE2AO00408 941 aaPredicted RBP13.65□□□□□ -0.22
CD9-208ENST00000538834 AURKAO14965 403 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 YY2O15391 372 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 KCNN4O15554 427 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 LIASO43766 372 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 ANXA9O76027 345 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 RASGRP1O95267 797 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 PYGLP06737 847 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 IVLP07476 585 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 HLA-DPA1P20036 260 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 KELP23276 732 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 HTR1BP28222 390 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 CHRNA4P43681 627 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 BLKP51451 505 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 GDF10P55107 478 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 ILKQ13418 452 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 SMAD1Q15797 465 aaKnown RBP13.65□□□□□ -0.22
CD9-208ENST00000538834 DARS2Q6PI48 645 aaKnown RBP13.65□□□□□ -0.22
CD9-208ENST00000538834 OGFOD3Q6PK18 319 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 ENPP7Q6UWV6 458 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 TMPRSS7Q7RTY8 843 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 C17orf82Q86X59 251 aaPredicted RBP13.65□□□□□ -0.22
CD9-208ENST00000538834 FSTL5Q8N475 847 aaPredicted RBP13.65□□□□□ -0.22
CD9-208ENST00000538834 GPR26Q8NDV2 337 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 ATL2Q8NHH9 583 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 CCDC110Q8TBZ0 833 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 GPBAR1Q8TDU6 330 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 PTCD2Q8WV60 388 aaKnown RBP13.65□□□□□ -0.22
CD9-208ENST00000538834 APOLD1Q96LR9 279 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 RIOK2Q9BVS4 552 aaKnown RBP13.65□□□□□ -0.22
CD9-208ENST00000538834 IL17CQ9P0M4 197 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 NEUROG3Q9Y4Z2 214 aa13.65□□□□□ -0.22
CD9-208ENST00000538834 PRSS38A1L453 326 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 CACNB4O00305 520 aaPredicted RBP13.64□□□□□ -0.23
CD9-208ENST00000538834 GAPDHSO14556 408 aaPredicted RBP13.64□□□□□ -0.23
CD9-208ENST00000538834 METTL18O95568 372 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 CELA2BP08218 269 aaPredicted RBP13.64□□□□□ -0.23
CD9-208ENST00000538834 CDK4P11802 303 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 PSMA3P25788 255 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 PSMB4P28070 264 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 STIP1P31948 543 aaKnown RBP13.64□□□□□ -0.23
CD9-208ENST00000538834 GEMP55040 296 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 DNAJC3Q13217 504 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 PCSK7Q16549 785 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 PARP6Q2NL67 630 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 PRRT3Q5FWE3 981 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 C6orf132Q5T0Z8 1188 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 DENND2CQ68D51 928 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 ITPRIPL1Q6GPH6 555 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 ZCCHC8Q6NZY4 707 aaKnown RBP13.64□□□□□ -0.23
CD9-208ENST00000538834 NRROSQ86YC3 692 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 RASGEF1CQ8N431 466 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 PNPLA1Q8N8W4 532 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 FAM83DQ9H4H8 585 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 MRPL40Q9NQ50 206 aaKnown RBP13.64□□□□□ -0.23
CD9-208ENST00000538834 PHPT1Q9NRX4 125 aaPredicted RBP13.64□□□□□ -0.23
CD9-208ENST00000538834 HACD3Q9P035 362 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 KLQ9UEF7 1012 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 RSPH14Q9UHP6 348 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 CD84Q9UIB8 345 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 TMPRSS11EQ9UL52 423 aa13.64□□□□□ -0.23
CD9-208ENST00000538834 DRG1Q9Y295 367 aaKnown RBP13.64□□□□□ -0.23
CD9-208ENST00000538834 ZKSCAN5Q9Y2L8 839 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms