RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	COX14	Q96I36	57 aa		12.27	□□□□□ -0.45
CLTCL1-205	ENST00000538828	AGAP3	Q96P47	875 aa		12.27	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ABCG8	Q9H221	673 aa		12.27	□□□□□ -0.45
CLTCL1-205	ENST00000538828	FGF22	Q9HCT0	170 aa		12.27	□□□□□ -0.45
CLTCL1-205	ENST00000538828	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	12.27	□□□□□ -0.45
CLTCL1-205	ENST00000538828	HACD3	Q9P035	362 aa		12.27	□□□□□ -0.45
CLTCL1-205	ENST00000538828	VPS18	Q9P253	973 aa		12.27	□□□□□ -0.45
CLTCL1-205	ENST00000538828	TFR2	Q9UP52	801 aa		12.27	□□□□□ -0.45
CLTCL1-205	ENST00000538828	DOLK	Q9UPQ8	538 aa		12.27	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ADGRG1	Q9Y653	693 aa		12.27	□□□□□ -0.45
CLTCL1-205	ENST00000538828	DMXL2	Q8TDJ6	3036 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	C1orf232	A0A0U1RR37	186 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	GOLGA6L9	A6NEM1	432 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828		A8MX80	341 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	C1QTNF9B	B2RNN3	333 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	NRDC	O43847	1150 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	OPA1	O60313	960 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	PPFIA2	O75334	1257 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	CLDN7	O95471	211 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	SOD1	P00441	154 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	CEACAM5	P06731	702 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	C1QTNF9	P0C862	333 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	HLA-DPA1	P20036	260 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	CD68	P34810	354 aa	Predicted RBP	12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	GPR1	P46091	355 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	INSM1	Q01101	510 aa	Predicted RBP	12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	LRP8	Q14114	963 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	RTP5	Q14D33	572 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ST3GAL2	Q16842	350 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	HES3	Q5TGS1	186 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ITPRIPL1	Q6GPH6	555 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	PID1	Q7Z2X4	250 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	TMC3	Q7Z5M5	1100 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	KLHDC8B	Q8IXV7	354 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	SLC35F3	Q8IY50	421 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	SPC24	Q8NBT2	197 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	GPR156	Q8NFN8	814 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	GPBAR1	Q8TDU6	330 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	OR1E3	Q8WZA6	343 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ALG3	Q92685	438 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	PDXP	Q96GD0	296 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	HES6	Q96HZ4	224 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	HIC2	Q96JB3	615 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	LGR4	Q9BXB1	951 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	TCEAL2	Q9H3H9	227 aa	Predicted RBP	12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	FAM83D	Q9H4H8	585 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	RMI1	Q9H9A7	625 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ZFYVE1	Q9HBF4	777 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	SEPT10	Q9P0V9	454 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	SAE1	Q9UBE0	346 aa	Predicted RBP	12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	CLCA2	Q9UQC9	943 aa		12.26	□□□□□ -0.45
CLTCL1-205	ENST00000538828	MYLK	Q15746	1914 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	GOLGA8CP	A6NN73	597 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ANXA9	O76027	345 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	STK10	O94804	968 aa	Known RBP	12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	PYGM	P11217	842 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	HMGCL	P35914	325 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	TNNT3	P45378	269 aa	Predicted RBP	12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ILF3	Q12906	894 aa	Known RBP eCLIP	12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	CLPP	Q16740	277 aa	Predicted RBP	12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	DEFB133	Q30KQ1	61 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	CCDC181	Q5TID7	509 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	KDELC1	Q6UW63	502 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	KDM7A	Q6ZMT4	941 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ZC3H18	Q86VM9	953 aa	Known RBP	12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	C17orf82	Q86X59	251 aa	Predicted RBP	12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ZNF567	Q8N184	647 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	PELI3	Q8N2H9	469 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ACTL9	Q8TC94	416 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	IFI44	Q8TCB0	444 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	LRRN4	Q8WUT4	740 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	PLEKHG4B	Q96PX9	1271 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	WDR24	Q96S15	920 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ZSCAN5A	Q9BUG6	496 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	GSDMC	Q9BYG8	508 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	GBA3	Q9H227	469 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	APPL1	Q9UKG1	709 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	PADI4	Q9UM07	663 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	FREM2	Q5SZK8	3169 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	UNC13C	Q8NB66	2214 aa		12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	URB1	O60287	2271 aa	Known RBP	12.25	□□□□□ -0.45
CLTCL1-205	ENST00000538828	MACROD2	A1Z1Q3	448 aa		12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828		H7C0C1	242 aa		12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	DDX3Y	O15523	660 aa	Known RBP	12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	MT-CYB	P00156	380 aa	Predicted RBP	12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	MT-CO3	P00414	261 aa		12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	FGF1	P05230	155 aa		12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	RBP3	P10745	1247 aa		12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	GLB1	P16278	677 aa		12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	MLLT3	P42568	568 aa	Predicted RBP	12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	ATP5O	P48047	213 aa		12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	GEM	P55040	296 aa		12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	WNT3A	P56704	352 aa		12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	OTUD4	Q01804	1114 aa	Known RBP	12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	KLF1	Q13351	362 aa	Predicted RBP	12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	C1orf61	Q13536	156 aa		12.24	□□□□□ -0.45
CLTCL1-205	ENST00000538828	DENND2C	Q68D51	928 aa		12.24	□□□□□ -0.45

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