RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 AURKAO14965 403 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 TSPAN6O43657 245 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 RNGTTO60942 597 aaKnown RBP17.21■□□□□ 0.34
CLN6-202ENST00000538696 CDH16O75309 829 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 USP1O94782 785 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 C1SP09871 688 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 NMBRP28336 390 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 MAGOHP61326 146 aaKnown RBP17.21■□□□□ 0.34
CLN6-202ENST00000538696 SRSF5Q13243 272 aaKnown RBP17.21■□□□□ 0.34
CLN6-202ENST00000538696 SEPT6Q14141 434 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 ANKRD20A4Q4UJ75 823 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 PCID2Q5JVF3 399 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 LRRC66Q68CR7 880 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 LYSMD3Q7Z3D4 306 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 TMEM135Q86UB9 458 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 TTC30BQ8N4P2 665 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 PPM1NQ8N819 430 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 PPHLN1Q8NEY8 458 aaKnown RBP17.21■□□□□ 0.34
CLN6-202ENST00000538696 CXorf40AQ8TE69 158 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 DCAKDQ8WVC6 231 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 KIFC1Q9BW19 673 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 KDM4CQ9H3R0 1056 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 C6orf106Q9H6K1 298 aaPredicted RBP17.21■□□□□ 0.34
CLN6-202ENST00000538696 PPCSQ9HAB8 311 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 CHRAC1Q9NRG0 131 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 SLC17A6Q9P2U8 582 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 PSMC3IPQ9P2W1 217 aaPredicted RBP17.21■□□□□ 0.34
CLN6-202ENST00000538696 TBK1Q9UHD2 729 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 ZFR2Q9UPR6 939 aaKnown RBP17.21■□□□□ 0.34
CLN6-202ENST00000538696 C1orf232A0A0U1RR37 186 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 ZCWPW2A0A1B0GU75 182 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 MAGEB16A2A368 324 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 FAM47DPA6NHR8 397 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 LRRC72A6NJI9 287 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 UGT1A9O60656 530 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 MMP20O60882 483 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 PCDH8O95206 1070 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 CLDN7O95471 211 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 POLBP06746 335 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 GM2AP17900 193 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 MSH2P43246 934 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 RASA2Q15283 850 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 SEL1L3Q68CR1 1132 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 KIAA1161Q6NSJ0 714 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 LIPIQ6XZB0 460 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 GLT6D1Q7Z4J2 308 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 CTAGE3PQ8IX95 158 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLN6-202ENST00000538696 FAM76AQ8TAV0 307 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 SLC44A1Q8WWI5 657 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 GAB3Q8WWW8 586 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 EID2BQ96D98 161 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 MFSD3Q96ES6 412 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 ZNF778Q96MU6 729 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 GPR174Q9BXC1 333 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 UGT1A7Q9HAW7 530 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 UGT1A10Q9HAW8 530 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 UGT1A8Q9HAW9 530 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 MRM3Q9HC36 420 aaKnown RBP17.2■□□□□ 0.34
CLN6-202ENST00000538696 ZSCAN32Q9NX65 697 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 IL1RAPL1Q9NZN1 696 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 HACD3Q9P035 362 aa17.2■□□□□ 0.34
CLN6-202ENST00000538696 TBC1D3DA0A087WVF3 549 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 TBC1D3IA0A087WXS9 549 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 TBC1D3EA0A087X179 549 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 TBC1D3KA0A087X1G2 549 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 A0A1W2PQU0 124 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 TBC1D3FA6NER0 549 aaPredicted RBP17.19■□□□□ 0.34
CLN6-202ENST00000538696 TBC1D3LB9A6J9 549 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 H0Y858 1186 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 SLC4A1P02730 911 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 ELFN1P0C7U0 828 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 TBC1D3HP0C7X1 549 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 C6P13671 934 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 ZNF30P17039 623 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 NR1D1P20393 614 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 LIG3P49916 1009 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 STC1P52823 247 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 ARHGEF7Q14155 803 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 FRG1Q14331 258 aaKnown RBP17.19■□□□□ 0.34
CLN6-202ENST00000538696 TMEM259Q4ZIN3 620 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 KIAA0895LQ68EN5 471 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 TBC1D3GQ6DHY5 549 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 TBC1D3CQ6IPX1 549 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 ADGRD1Q6QNK2 874 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 SLC36A4Q6YBV0 504 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 HSD11B1LQ7Z5J1 315 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 TRIM69Q86WT6 500 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 HORMAD1Q86X24 394 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 TBC1D3Q8IZP1 549 aaPredicted RBP17.19■□□□□ 0.34
CLN6-202ENST00000538696 PTCD2Q8WV60 388 aaKnown RBP17.19■□□□□ 0.34
CLN6-202ENST00000538696 CERS2Q96G23 380 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 PKNOX2Q96KN3 472 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 RANBP9Q96S59 729 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 SRPK1Q96SB4 655 aaKnown RBP17.19■□□□□ 0.34
CLN6-202ENST00000538696 STMN4Q9H169 189 aaPredicted RBP17.19■□□□□ 0.34
CLN6-202ENST00000538696 TRABDQ9H4I3 376 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 ZFYVE1Q9HBF4 777 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLN6-202ENST00000538696 COQ6Q9Y2Z9 468 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms