RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 A0A1W2PRG6 482 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 F8VP50 259 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 PDHXO00330 501 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 VNN1O95497 513 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 NR3C2P08235 984 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 TPSB2P20231 275 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 F8A1P23610 371 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 KDELR1P24390 212 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 GTF2E2P29084 291 aaKnown RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 GGT5P36269 586 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 HNF4AP41235 474 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 SLC15A1P46059 708 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 ARSFP54793 590 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 GPR85P60893 370 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 NKX3-2P78367 333 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 RIN1Q13671 783 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 DAG1Q14118 895 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 FASTKQ14296 549 aaKnown RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 TPSAB1Q15661 275 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 C2CD6Q53TS8 623 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 TREML2Q5T2D2 321 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 PRSS42Q7Z5A4 293 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 LDHDQ86WU2 507 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 MICU2Q8IYU8 434 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 TXNDC5Q8NBS9 432 aaKnown RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 PJA1Q8NG27 643 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 MCOLN3Q8TDD5 553 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 KCTD4Q8WVF5 259 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 DNAJA4Q8WW22 397 aaPredicted RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 RPL3LQ92901 407 aaKnown RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 TESCQ96BS2 214 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 BIRC7Q96CA5 298 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 ASIC4Q96FT7 647 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 FEM1AQ9BSK4 669 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 NTN4Q9HB63 628 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 GPRC5CQ9NQ84 441 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 GGA1Q9UJY5 639 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 VAV3Q9UKW4 847 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 STAP1Q9ULZ2 295 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 ANKRD6Q9Y2G4 727 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 ZNF330Q9Y3S2 320 aaPredicted RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 MEIOCA2RUB1 952 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 TPST1O60507 370 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 SUPT7LO94864 414 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 PIGNO95427 931 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 RBP1P09455 135 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 CYP2A6P11509 494 aaPredicted RBP12.41□□□□□ -0.42
USP3-203ENST00000538686 MAPKAPK2P49137 400 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 RPL7AP62424 266 aaKnown RBP12.41□□□□□ -0.42
USP3-203ENST00000538686 MGAT3Q09327 533 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 ZNF252P-AS1Q0IIN9 211 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 IL18R1Q13478 541 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 NOMO1Q15155 1222 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 CA9Q16790 459 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 HABP4Q5JVS0 413 aaKnown RBP12.41□□□□□ -0.42
USP3-203ENST00000538686 SPANXN2Q5MJ10 180 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 ZBTB37Q5TC79 503 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 TMEM65Q6PI78 240 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 TLK2Q86UE8 772 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 SPPL2CQ8IUH8 684 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 EID3Q8N140 333 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 AGR3Q8TD06 166 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 TSNARE1Q96NA8 513 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 DCSTAMPQ9H295 470 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 DCAF16Q9NXF7 216 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 ADAM11O75078 769 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 ASS1P00966 412 aaKnown RBP12.41□□□□□ -0.42
USP3-203ENST00000538686 HLA-DRAP01903 254 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 PRKCBP05771 671 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 RPS17P08708 135 aaKnown RBP12.41□□□□□ -0.42
USP3-203ENST00000538686 SNHG28P0DPA3 235 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 TGFB3P10600 412 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 IL7RP16871 459 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 GZMKP49863 264 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 NCS1P62166 190 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 EMX1Q04741 257 aaPredicted RBP12.41□□□□□ -0.42
USP3-203ENST00000538686 UGP2Q16851 508 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 NXNL2Q5VZ03 156 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 KCTD1Q719H9 257 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 FANK1Q8TC84 345 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 MCEEQ96PE7 176 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 CBWD1Q9BRT8 395 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 SDCBP2Q9H190 292 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 SOX17Q9H6I2 414 aaPredicted RBP12.41□□□□□ -0.42
USP3-203ENST00000538686 FANCFQ9NPI8 374 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 TLR9Q9NR96 1032 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 PGAP2Q9UHJ9 254 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 INTS6Q9UL03 887 aaKnown RBP12.41□□□□□ -0.42
USP3-203ENST00000538686 TRAPPC4Q9Y296 219 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 PCDHB3Q9Y5E6 796 aa12.41□□□□□ -0.42
USP3-203ENST00000538686 SNED1Q8TER0 1413 aa12.4□□□□□ -0.42
USP3-203ENST00000538686 SLIT2O94813 1529 aa12.4□□□□□ -0.42
USP3-203ENST00000538686 NAV1Q8NEY1 1877 aa12.4□□□□□ -0.42
USP3-203ENST00000538686 EFCAB9A8MZ26 197 aa12.4□□□□□ -0.42
USP3-203ENST00000538686 I3L521 148 aa12.4□□□□□ -0.42
USP3-203ENST00000538686 SLC1A7O00341 560 aa12.4□□□□□ -0.42
USP3-203ENST00000538686 SH3BP5O60239 455 aa12.4□□□□□ -0.42
USP3-203ENST00000538686 FGF18O76093 207 aa12.4□□□□□ -0.42
USP3-203ENST00000538686 WDPCPO95876 746 aa12.4□□□□□ -0.42
USP3-203ENST00000538686 FTH1P02794 183 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms