RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 KLHDC8BQ8IXV7 354 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 SLC35F3Q8IY50 421 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 TTC30BQ8N4P2 665 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 RNF10Q8N5U6 811 aaKnown RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 HTR3CQ8WXA8 447 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 SCARF2Q96GP6 870 aaPredicted RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 COX14Q96I36 57 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 CALR3Q96L12 384 aaKnown RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 WDR92Q96MX6 357 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 ZNF830Q96NB3 372 aaPredicted RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 FCRL5Q96RD9 977 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 RIOK2Q9BVS4 552 aaKnown RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 C1QTNF7Q9BXJ2 289 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 NLGN3Q9NZ94 848 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 APOBEC3BQ9UH17 382 aaKnown RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 RABGEF1Q9UJ41 708 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 AMFRQ9UKV5 643 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 RPL26L1Q9UNX3 145 aaKnown RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 SHOC2Q9UQ13 582 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 TMEM98Q9Y2Y6 226 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 PCDHGA1Q9Y5H4 931 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 SPENQ96T58 3664 aaKnown RBP8.37□□□□□ -1.07
SPARC-208ENST00000538026 C1orf232A0A0U1RR37 186 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 A0A1W2PNU3 283 aaPredicted RBP8.37□□□□□ -1.07
SPARC-208ENST00000538026 HACD1B0YJ81 288 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 TPP1O14773 563 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 ARHGAP6O43182 974 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 IPO7O95373 1038 aaKnown RBP8.37□□□□□ -1.07
SPARC-208ENST00000538026 NDST3O95803 873 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 RBP3P10745 1247 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 TEAD1P28347 426 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 ADRA1AP35348 466 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 GDF10P55107 478 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 EIF3EP60228 445 aaKnown RBP8.37□□□□□ -1.07
SPARC-208ENST00000538026 CDK18Q07002 472 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 PTK2BQ14289 1009 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 PTPRCAPQ14761 206 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 PCSK7Q16549 785 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 KHDC1Q4VXA5 237 aaKnown RBP8.37□□□□□ -1.07
SPARC-208ENST00000538026 SIRPB2Q5JXA9 342 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 PERM1Q5SV97 790 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 ZNF648Q5T619 568 aaPredicted RBP8.37□□□□□ -1.07
SPARC-208ENST00000538026 MEI1Q5TIA1 1274 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 CDCP2Q5VXM1 449 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 DENND5AQ6IQ26 1287 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 GUSBP11Q6P575 273 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 ADAMTSL4Q6UY14 1074 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 ZNF765Q7L2R6 523 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 PID1Q7Z2X4 250 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 RD3Q7Z3Z2 195 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 GPR26Q8NDV2 337 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 OR56A4Q8NGH8 313 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 SLC35B2Q8TB61 432 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 CCDC110Q8TBZ0 833 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 AP2M1Q96CW1 435 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 TBATAQ96M53 351 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 TLR10Q9BXR5 811 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 KCNF1Q9H3M0 494 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 WDR26Q9H7D7 661 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 GRPEL1Q9HAV7 217 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 SPATS2LQ9NUQ6 558 aaKnown RBP8.37□□□□□ -1.07
SPARC-208ENST00000538026 GUCA1BQ9UMX6 200 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 APOBEC2Q9Y235 224 aaKnown RBP8.37□□□□□ -1.07
SPARC-208ENST00000538026 SLC17A4Q9Y2C5 497 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.37□□□□□ -1.07
SPARC-208ENST00000538026 PIKFYVEQ9Y2I7 2098 aa8.37□□□□□ -1.07
SPARC-208ENST00000538026 PRSS38A1L453 326 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 EME2A4GXA9 379 aaPredicted RBP8.36□□□□□ -1.07
SPARC-208ENST00000538026 H7C0C1 242 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 GAPDHSO14556 408 aaPredicted RBP8.36□□□□□ -1.07
SPARC-208ENST00000538026 TNFRSF10CO14798 259 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 NOBOXO60393 691 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 RFPL3O75679 317 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 RASGRP1O95267 797 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 METTL18O95568 372 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 EML2O95834 649 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 AGTP01019 485 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 EPOP01588 193 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 MYCLP1P12525 358 aaPredicted RBP8.36□□□□□ -1.07
SPARC-208ENST00000538026 ZNF30P17039 623 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 BPIP17213 487 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 AK4P27144 223 aaPredicted RBP8.36□□□□□ -1.07
SPARC-208ENST00000538026 PSMB4P28070 264 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 ATP5OP48047 213 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 EPHB1P54762 984 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 ARHGEF7Q14155 803 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 OASLQ15646 514 aaKnown RBP8.36□□□□□ -1.07
SPARC-208ENST00000538026 INAVAQ3KP66 663 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 ODF2Q5BJF6 829 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 ANKRD20A2Q5SQ80 823 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 C6orf132Q5T0Z8 1188 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 ANKRD20A1Q5TYW2 823 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 ANKRD20A3Q5VUR7 823 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 RAET1GQ6H3X3 334 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 OGFOD3Q6PK18 319 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 RANBP10Q6VN20 620 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 BZW1Q7L1Q6 419 aaKnown RBP8.36□□□□□ -1.07
SPARC-208ENST00000538026 PRUNE1Q86TP1 453 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 NRSN1Q8IZ57 195 aa8.36□□□□□ -1.07
SPARC-208ENST00000538026 PAF1Q8N7H5 531 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms