RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 GRK3P35626 688 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 SLC7A2P52569 658 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 CDH6P55285 790 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 CACNB2Q08289 660 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 MFSD10Q14728 455 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 C15orf59Q2T9L4 293 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 SMU1Q2TAY7 513 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 MFSD14CQ5VZR4 134 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 PMF1Q6P1K2 205 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 NEK5Q6P3R8 708 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 R3HCC1LQ7Z5L2 792 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 SPPL2CQ8IUH8 684 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 GRPEL2Q8TAA5 225 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 HMGCLL1Q8TB92 370 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 RDH11Q8TC12 318 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 RNF157Q96PX1 679 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 CPNE1Q99829 537 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 FAM49AQ9H0Q0 323 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 INTS10Q9NVR2 710 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 STMN3Q9NZ72 180 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 SLCO3A1Q9UIG8 710 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 GINS2Q9Y248 185 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 SPEF1Q9Y4P9 236 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 PMF1-BGLAPU3KQ54 211 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 MN1Q10571 1320 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 B8ZZF3 427 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 SDHDO14521 159 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 MFN2O95140 757 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 ALBP02768 609 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 APOA4P06727 396 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 SNRPB2P08579 225 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 PKLRP30613 574 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 TNFSF9P41273 254 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 CLCNKBP51801 687 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 ZNF135P52742 658 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 FASTKQ14296 549 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 SQLEQ14534 574 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 PUS10Q3MIT2 529 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 ZYG11AQ6WRX3 759 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 CATSPER4Q7RTX7 472 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 POC5Q8NA72 575 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 CHID1Q9BWS9 393 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 DGCR6LQ9BY27 220 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 B3GNT4Q9C0J1 378 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 C2orf40Q9H1Z8 148 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 FZD8Q9H461 694 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 HPS4Q9NQG7 708 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 ABCB10Q9NRK6 738 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 ZNF639Q9UID6 485 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 PTPRJQ12913 1337 aa11.35□□□□□ -0.59
SEMA4D-221ENST00000537934 A0A096LPK6 155 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 CCDC78A2IDD5 438 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 SAGE2PA6NJ88 616 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 H0Y858 1186 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 AP3B1O00203 1094 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 MTSS1O43312 755 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 DUSP11O75319 330 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 MLNP12872 115 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 PGAM1P18669 254 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 TGM2P21980 687 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 CCND3P30281 292 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 SHMT2P34897 504 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 DUSP7Q16829 419 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 AGKQ53H12 422 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 GNASQ5JWF2 1037 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 SNAP47Q5SQN1 464 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 EEF1DP3Q658K8 133 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 DESI1Q6ICB0 168 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 LCN8Q6JVE9 175 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 ZPBP2Q6X784 338 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 CCDC28AQ8IWP9 274 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 ADGRG5Q8IZF4 528 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 OR6F1Q8NGZ6 308 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 HDAC2Q92769 488 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 SLC25A23Q9BV35 468 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 ADNPQ9H2P0 1102 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 SLA2Q9H6Q3 261 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 TLR9Q9NR96 1032 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 TTC24A2A3L6 582 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 ACKR2O00590 384 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 NRP2O60462 931 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 TMCC2O75069 709 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 SEC24AO95486 1093 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 PRKAR2AP13861 404 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 SPNP16150 400 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 HDCP19113 662 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 IMPDH1P20839 514 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 LRPAP1P30533 357 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 RRM2P31350 389 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 RFC2P35250 354 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 PSEN2P49810 448 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 GABARAPL2P60520 117 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 CTAG1AP78358 180 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 MRPS15P82914 257 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 PURAQ00577 322 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 IRF9Q00978 393 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 SEMA5AQ13591 1074 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 ADPRMQ3LIE5 342 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 AGAP6Q5VW22 663 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 SLFN12LQ6IEE8 588 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms