RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 PELI3Q8N2H9 469 aa15.61■□□□□ 0.09
SFSWAP-206ENST00000537582 SPEM1Q8N4L4 309 aa15.61■□□□□ 0.09
SFSWAP-206ENST00000537582 KLK6Q92876 244 aa15.61■□□□□ 0.09
SFSWAP-206ENST00000537582 RAB7BQ96AH8 199 aa15.61■□□□□ 0.09
SFSWAP-206ENST00000537582 CCDC97Q96F63 343 aaPredicted RBP15.61■□□□□ 0.09
SFSWAP-206ENST00000537582 COQ10AQ96MF6 247 aa15.61■□□□□ 0.09
SFSWAP-206ENST00000537582 CYTH2Q99418 400 aa15.61■□□□□ 0.09
SFSWAP-206ENST00000537582 PAFAH2Q99487 392 aa15.61■□□□□ 0.09
SFSWAP-206ENST00000537582 ZFR2Q9UPR6 939 aaKnown RBP15.61■□□□□ 0.09
SFSWAP-206ENST00000537582 TLDC2A0PJX2 215 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 IGLON5A6NGN9 336 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 SLC7A4O43246 635 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 PLRG1O43660 514 aaKnown RBP15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 PCDH8O95206 1070 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 UGT1A6P19224 532 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 UGT1A1P22309 533 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 UGT1A4P22310 534 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 FOXN2P32314 431 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 UGT1A3P35503 534 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 UGT1A5P35504 534 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 SUOXP51687 545 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 STAT4Q14765 748 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 CHRNA6Q15825 494 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 ZNF789Q5FWF6 425 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 CEP85LQ5SZL2 805 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 PSAPL1Q6NUJ1 521 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 CYS1Q717R9 158 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 SPNS2Q8IVW8 549 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 OTUD6BQ8N6M0 293 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 OR4L1Q8NH43 312 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 CXorf40AQ8TE69 158 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 NAT14Q8WUY8 206 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 RLN3Q8WXF3 142 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 PEX13Q92968 403 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 ABCG8Q9H221 673 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 ZFATQ9P243 1243 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 VPS18Q9P253 973 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 USP36Q9P275 1121 aaKnown RBP15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 CYP8B1Q9UNU6 501 aa15.6■□□□□ 0.09
SFSWAP-206ENST00000537582 TMEM221A6NGB7 291 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 H7C0S8 307 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 M0R296 226 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 AP1G1O43747 822 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 RECQL5O94762 991 aaPredicted RBP15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 PRAMEF1O95521 474 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 GABRB3P28472 473 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 SPAM1P38567 509 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 HADHAP40939 763 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 PPP2CBP62714 309 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 PPP2CAP67775 309 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 DMWDQ09019 674 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 THOC5Q13769 683 aaKnown RBP15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 FGL2Q14314 439 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 NUMA1Q14980 2115 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 KLHL38Q2WGJ6 581 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 ZRANB3Q5FWF4 1079 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 AFTPHQ6ULP2 937 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 USP30Q70CQ3 517 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 MARK2Q7KZI7 788 aaKnown RBP15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 FAM160A2Q8N612 972 aaPredicted RBP15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 DCAKDQ8WVC6 231 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 DHRS4Q9BTZ2 278 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 RIOK2Q9BVS4 552 aaKnown RBP15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 ITM2CQ9NQX7 267 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 FBXO6Q9NRD1 293 aaPredicted RBP15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 CATSPERZQ9NTU4 200 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 PKD2L2Q9NZM6 624 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 SCML1Q9UN30 329 aa15.59■□□□□ 0.09
SFSWAP-206ENST00000537582 GLYATL1P3A0A0U1RQE8 302 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 H0Y858 1186 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 K7ESM1 405 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 WNT9AO14904 365 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 CD3EAPO15446 510 aaKnown RBP15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 ATP8B1O43520 1251 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 TSPAN6O43657 245 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 LZTS3O60299 673 aaPredicted RBP15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 SRP72O76094 671 aaKnown RBP15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 NFKBIAP25963 317 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 MAT2AP31153 395 aaKnown RBP15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 KRT71Q3SY84 523 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 TSSK4Q6SA08 328 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 LRIG3Q6UXM1 1119 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 STRA8Q7Z7C7 330 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 LRRC6Q86X45 466 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 CNTN4Q8IWV2 1026 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 CYP4X1Q8N118 509 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 SLC44A1Q8WWI5 657 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 DTD2Q96FN9 168 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 ATXN7L3BQ96GX2 97 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 VIPAS39Q9H9C1 493 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 TBK1Q9UHD2 729 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 TMPRSS11EQ9UL52 423 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 FZD4Q9ULV1 537 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 INVSQ9Y283 1065 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 NCKAP1Q9Y2A7 1128 aa15.58■□□□□ 0.09
SFSWAP-206ENST00000537582 LRRK1Q38SD2 2015 aa15.58■□□□□ 0.08
SFSWAP-206ENST00000537582 A0A1W2PQU0 124 aa15.58■□□□□ 0.08
SFSWAP-206ENST00000537582 FADS2P1A8MWK0 482 aa15.58■□□□□ 0.08
SFSWAP-206ENST00000537582 K7ESF4 209 aa15.58■□□□□ 0.08
SFSWAP-206ENST00000537582 RASGRF2O14827 1237 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms