RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 METAP1P53582 386 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 MTA1Q13330 715 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 HNRNPDQ14103 355 aaKnown RBP11.97□□□□□ -0.49
CLIP1-208ENST00000537004 LINGO4Q6UY18 593 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 SLC36A4Q6YBV0 504 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 TIFABQ6ZNK6 161 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 CDHR3Q6ZTQ4 885 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 METTL3Q86U44 580 aaKnown RBP11.97□□□□□ -0.49
CLIP1-208ENST00000537004 MMAAQ8IVH4 418 aaKnown RBP11.97□□□□□ -0.49
CLIP1-208ENST00000537004 OR7D4Q8NG98 312 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 CCT6BQ92526 530 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 PTPRN2Q92932 1015 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 FATE1Q969F0 183 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 MFSD3Q96ES6 412 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 SLC13A1Q9BZW2 595 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 CHRAC1Q9NRG0 131 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 PCMTD2Q9NV79 361 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 TXNDC16Q9P2K2 825 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 SUN2Q9UH99 717 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 CDV3Q9UKY7 258 aaKnown RBP11.97□□□□□ -0.49
CLIP1-208ENST00000537004 PHTF1Q9UMS5 762 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 ARL2BPQ9Y2Y0 163 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 SLCO1B1Q9Y6L6 691 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 CKAP5Q14008 2032 aa11.97□□□□□ -0.49
CLIP1-208ENST00000537004 J3KR12 359 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 BNIP3LO60238 219 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 EDF1O60869 148 aaKnown RBP11.96□□□□□ -0.49
CLIP1-208ENST00000537004 PMPCBO75439 489 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 RHOCP08134 193 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 SRPRAP08240 638 aaKnown RBP11.96□□□□□ -0.49
CLIP1-208ENST00000537004 RENBPP51606 427 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 PLK1P53350 603 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 SLC12A1Q13621 1099 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 E2F5Q15329 346 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 ACCSLQ4AC99 568 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 TRIM61Q5EBN2 209 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 ZNF354CQ86Y25 554 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 SYT12Q8IV01 421 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 NDUFAF2Q8N183 169 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 STK40Q8N2I9 435 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 CCDC63Q8NA47 563 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 FRS2Q8WU20 508 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 FAM129BQ96TA1 746 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 CPNE1Q99829 537 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 FICDQ9BVA6 458 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 KDM4CQ9H3R0 1056 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 SP110Q9HB58 689 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 PILRBQ9UKJ0 227 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 PLLPQ9Y342 182 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 ACTL7AQ9Y615 435 aa11.96□□□□□ -0.49
CLIP1-208ENST00000537004 PRR5-ARHGAP8B1AHC4 643 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 MID1O15344 667 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 SMAD6O43541 496 aaKnown RBP11.96□□□□□ -0.5
CLIP1-208ENST00000537004 RAMP2O60895 175 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 ALDOAP04075 364 aaKnown RBP11.96□□□□□ -0.5
CLIP1-208ENST00000537004 ITGA2BP08514 1039 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 NMBRP28336 390 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 ADRA1AP35348 466 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 GP5P40197 560 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 SERPINB4P48594 390 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 MAPKAPK2P49137 400 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 ARHGAP8P85298 464 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 SLC10A7Q0GE19 358 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 POLD3Q15054 466 aaPredicted RBP11.96□□□□□ -0.5
CLIP1-208ENST00000537004 POM121L1PQ3SYA9 428 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 PARP15Q460N3 678 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 DENND5AQ6IQ26 1287 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 Q6ZVU0 165 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 RGL4Q8IZJ4 473 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 PLCD4Q9BRC7 762 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 KIFC1Q9BW19 673 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 FSD1LQ9BXM9 530 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 RSPH9Q9H1X1 276 aaPredicted RBP11.96□□□□□ -0.5
CLIP1-208ENST00000537004 MANSC1Q9H8J5 431 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 NT5MQ9NPB1 228 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 VPS51Q9UID3 782 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 FRYQ5TBA9 3013 aa11.96□□□□□ -0.5
CLIP1-208ENST00000537004 A0A1W2PP55 124 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 PLK4O00444 970 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 DNTTP04053 509 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 CFIP05156 583 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 CRHR1P34998 444 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 MPP3Q13368 585 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 SERINC3Q13530 473 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 DLG2Q15700 870 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 SPRED3Q2MJR0 410 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 GRTP1Q5TC63 336 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 MARC1Q5VT66 337 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 ZNF776Q68DI1 518 aaPredicted RBP11.95□□□□□ -0.5
CLIP1-208ENST00000537004 OTOAQ7RTW8 1153 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 TRPM8Q7Z2W7 1104 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 SETD3Q86TU7 594 aaPredicted RBP11.95□□□□□ -0.5
CLIP1-208ENST00000537004 KCNMB4Q86W47 210 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 CNPY4Q8N129 248 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 KDM1BQ8NB78 822 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 ACMSDQ8TDX5 336 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 GANCQ8TET4 914 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 MRGPRX2Q96LB1 330 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 SPON2Q9BUD6 331 aa11.95□□□□□ -0.5
CLIP1-208ENST00000537004 EDEM2Q9BV94 578 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms