RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 APOBEC2Q9Y235 224 aaKnown RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 BTBD3Q9Y2F9 522 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 EFR3BQ9Y2G0 817 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.12□□□□□ -1.271e-7■□□□□ 8.6
YBX3-206ENST00000536823 FADS3Q9Y5Q0 445 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 COL5A1P20908 1838 aaPredicted RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 A0A087X0T9 212 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 ARHGAP42A6NI28 874 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 KRIT1O00522 736 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 KCNK3O14649 394 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 SLC31A1O15431 190 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 CBFA2T2O43439 604 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 PSPNO60542 156 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 MAGEC1O60732 1142 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 PRAMEF11O60813 436 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 PCDH8O95206 1070 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 POP4O95707 220 aaKnown RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 IGSF6O95976 241 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 TOP3BO95985 862 aaKnown RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 CYP1A2P05177 515 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 UGT2B4P06133 528 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 FAM228BP0C875 321 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 ERCC2P18074 760 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 HNRNPA2B1P22626 353 aaKnown RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 IL1R2P27930 398 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 EPHA8P29322 1005 aaPredicted RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 HNRNPH3P31942 346 aaKnown RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 GKP32189 559 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 RXRGP48443 463 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 ARRB1P49407 418 aaPredicted RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 RHOAP61586 193 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 NFKB2Q00653 900 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 IL9RQ01113 521 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 RAD51Q06609 339 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 DPYSQ14117 519 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 PIGHQ14442 188 aaPredicted RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 SHBQ15464 509 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 DPYSL2Q16555 572 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 MYLK3Q32MK0 819 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 PPP6R3Q5H9R7 873 aaPredicted RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 WIPI1Q5MNZ9 446 aaPredicted RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 AFMIDQ63HM1 303 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 SEL1L3Q68CR1 1132 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 KIAA1161Q6NSJ0 714 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 ALKBH5Q6P6C2 394 aaKnown RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 LRFN4Q6PJG9 635 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 HDXQ7Z353 690 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 SPATS2Q86XZ4 545 aaKnown RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 ARHGAP12Q8IWW6 846 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 RYBPQ8N488 228 aaPredicted RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 NPWQ8N729 165 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 NIPA2Q8N8Q9 360 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 CPLX3Q8WVH0 158 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 UBXN4Q92575 508 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 KLK6Q92876 244 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 RAB7BQ96AH8 199 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 ARHGEF26Q96DR7 871 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 PLPPR2Q96GM1 343 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 CELF6Q96J87 481 aaKnown RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 MYOCQ99972 504 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 SCNM1Q9BWG6 230 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 THAP2Q9H0W7 228 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 ERVMER34-1Q9H9K5 563 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 SEMA3GQ9NS98 782 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 UBA2Q9UBT2 640 aaPredicted RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 ANAPC7Q9UJX3 599 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 CA5BQ9Y2D0 317 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 POLR3KQ9Y2Y1 108 aaPredicted RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 MFHAS1Q9Y4C4 1052 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 NEUROG3Q9Y4Z2 214 aa7.11□□□□□ -1.27
YBX3-206ENST00000536823 TDRD6O60522 2096 aaKnown RBP7.11□□□□□ -1.27
YBX3-206ENST00000536823 C16orf96A6NNT2 1141 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 J3KR12 359 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 AREL1O15033 823 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 DAPK3O43293 454 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 TNFSF14O43557 240 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 TSPAN6O43657 245 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 THEGLP0DJG4 465 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 TCF4P15884 667 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 CASP14P31944 242 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 ARL4AP40617 200 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 HCAR3P49019 387 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 PAPOLAP51003 745 aaKnown RBP7.1□□□□□ -1.27
YBX3-206ENST00000536823 RPS21P63220 83 aaKnown RBP7.1□□□□□ -1.27
YBX3-206ENST00000536823 SLC25A11Q02978 314 aaKnown RBP7.1□□□□□ -1.27
YBX3-206ENST00000536823 FGL2Q14314 439 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 STAT4Q14765 748 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 CYTH1Q15438 398 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 SMTNL2Q2TAL5 461 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 BOLA3Q53S33 107 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 PRAMEF14Q5SWL7 426 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 CCDC122Q5T0U0 273 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 SPECC1LQ69YQ0 1117 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 UNQ6494/PRO21346Q6UXR6 183 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 GDPD4Q6W3E5 623 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 KYAT3Q6YP21 454 aaKnown RBP7.1□□□□□ -1.27
YBX3-206ENST00000536823 GCNT7Q6ZNI0 430 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 KANSL1Q7Z3B3 1105 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 POLNQ7Z5Q5 900 aa7.1□□□□□ -1.27
YBX3-206ENST00000536823 ABI3BPQ7Z7G0 1075 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms