RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 CACNA2D4Q7Z3S7 1137 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 SDCCAG8Q86SQ7 713 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-208ENST00000536710 PIP4P1Q86T03 277 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 HACE1Q8IYU2 909 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 SCYL3Q8IZE3 742 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 POMGNT2Q8NAT1 580 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 MCUQ8NE86 351 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 KIFC3Q9BVG8 833 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 PIGMQ9H3S5 423 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 POT1Q9NUX5 634 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 SLC9A2Q9UBY0 812 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 FBXW11Q9UKB1 542 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 CDC14AQ9UNH5 594 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 BTBD3Q9Y2F9 522 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 RAI2Q9Y5P3 530 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 CLIC4Q9Y696 253 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 hCG_1809904A0A1W2PP81 198 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 A0A1W2PPE2 198 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 A0A1W2PR64 198 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 GLOD5A6NK44 160 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 BECN2A8MW95 431 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 VWA5AO00534 786 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 TIMM23O14925 209 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 ASAP2O43150 1006 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 ZIC3O60481 467 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 AVILO75366 819 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 VNN2O95498 520 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 TBXAS1P24557 533 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 MATR3P43243 847 aaKnown RBP eCLIP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 MSH2P43246 934 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 ADORA2A-AS1P86434 159 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 AIMP1Q12904 312 aaKnown RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 TRAF1Q13077 416 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 TNFAIP1Q13829 316 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 KLF9Q13886 244 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 ETFDHQ16134 617 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 CCDC96Q2M329 555 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 FSCBQ5H9T9 825 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 DNTTIP2Q5QJE6 756 aaKnown RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 TYW3Q6IPR3 259 aaKnown RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 AACSQ86V21 672 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 ARID3BQ8IVW6 561 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 SRRM1Q8IYB3 904 aaKnown RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 SYT2Q8N9I0 419 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 RPL36ALQ969Q0 106 aaKnown RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 BAG1Q99933 345 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 KXD1Q9BQD3 176 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 LTB4R2Q9NPC1 389 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 CNGB3Q9NQW8 809 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 ACSS1Q9NUB1 689 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-208ENST00000536710 COPG2Q9UBF2 871 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 OR14J1Q9UGF5 321 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 PADI1Q9ULC6 663 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 ZNF711Q9Y462 761 aa5.45□□□□□ -1.54
PRKDC-208ENST00000536710 A0A1B0GVM2 712 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 WDR91A4D1P6 747 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 A6NL46 340 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 J3KR12 359 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 DAB1O75553 588 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 EGFP01133 1207 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 MMP9P14780 707 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 MAOAP21397 527 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 UBA1P22314 1058 aaKnown RBP5.44□□□□□ -1.54
PRKDC-208ENST00000536710 HOXC9P31274 260 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 LIG4P49917 911 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 PNLIPRP2P54317 469 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 NANOS3P60323 173 aaKnown RBP5.44□□□□□ -1.54
PRKDC-208ENST00000536710 TMF1P82094 1093 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 SRSF1Q07955 248 aaKnown RBP eCLIP5.44□□□□□ -1.54
PRKDC-208ENST00000536710 DLG2Q15700 870 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 ZNF805Q5CZA5 627 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 FNBP1LQ5T0N5 605 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 RPUSD3Q6P087 351 aaKnown RBP5.44□□□□□ -1.54
PRKDC-208ENST00000536710 SLC36A4Q6YBV0 504 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 TAOK1Q7L7X3 1001 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 PIM3Q86V86 326 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 ZC3HC1Q86WB0 502 aaKnown RBP5.44□□□□□ -1.54
PRKDC-208ENST00000536710 AADATQ8N5Z0 425 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 DNAJC18Q9H819 358 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 PLAC1Q9HBJ0 212 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 CCDC177Q9NQR7 707 aaPredicted RBP5.44□□□□□ -1.54
PRKDC-208ENST00000536710 ZBTB40Q9NUA8 1239 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 PAG1Q9NWQ8 432 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 MTMR10Q9NXD2 777 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 IL36RNQ9UBH0 155 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 INSL5Q9Y5Q6 135 aa5.44□□□□□ -1.54
PRKDC-208ENST00000536710 LOC100509620A0A075B734 347 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 M0QZ24 198 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 ADAMDEC1O15204 470 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 PAPSS1O43252 624 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 HSPA12AO43301 675 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 KCNK5O95279 499 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 ICAM1P05362 532 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 ABCB1P08183 1280 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 TMEM191BP0C7N4 346 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 DDX5P17844 614 aaKnown RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 ACADLP28330 430 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 HNRNPH1P31943 449 aaKnown RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 STX2P32856 288 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 CAPZA2P47755 286 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms