RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 UPF2Q9HAU5 1272 aaKnown RBP4.3□□□□□ -1.72
VBP1-203ENST00000535916 HINT3Q9NQE9 182 aaKnown RBP4.3□□□□□ -1.72
VBP1-203ENST00000535916 C20orf141Q9NUB4 165 aa4.3□□□□□ -1.72
VBP1-203ENST00000535916 TMEM160Q9NX00 188 aa4.3□□□□□ -1.72
VBP1-203ENST00000535916 TTC7AQ9ULT0 858 aaPredicted RBP4.3□□□□□ -1.72
VBP1-203ENST00000535916 CACNA1FO60840 1977 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 CTAGE9A4FU28 777 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 SMIM1B2RUZ4 78 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 TEX22C9J3V5 150 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 IGHV4-39P01824 125 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 TFP02787 698 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 CTAGE8P0CG41 777 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 MMP14P50281 582 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 GNB1P62873 340 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 EEF1A1P68104 462 aaKnown RBP4.29□□□□□ -1.72
VBP1-203ENST00000535916 SLC12A1Q13621 1099 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 PPP2R5BQ15173 497 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 PDCD2Q16342 344 aaPredicted RBP4.29□□□□□ -1.72
VBP1-203ENST00000535916 LPAL2Q16609 132 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 HIST2H2ACQ16777 129 aaPredicted RBP4.29□□□□□ -1.72
VBP1-203ENST00000535916 WDR45BQ5MNZ6 344 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 EEF1A1P5Q5VTE0 462 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 ANO1Q5XXA6 986 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 TMEM81Q6P7N7 255 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 CPLX2Q6PUV4 134 aaKnown RBP4.29□□□□□ -1.72
VBP1-203ENST00000535916 ATF7IPQ6VMQ6 1270 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 C15orf39Q6ZRI6 1047 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.29□□□□□ -1.72
VBP1-203ENST00000535916 CTAGE4Q8IX94 777 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 PCDH20Q8N6Y1 951 aaKnown RBP4.29□□□□□ -1.72
VBP1-203ENST00000535916 C11orf65Q8NCR3 313 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 TM9SF4Q92544 642 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 HSPB7Q9UBY9 170 aa4.29□□□□□ -1.72
VBP1-203ENST00000535916 IRAK2O43187 625 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 FTCDO95954 541 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 CHRNB4P30926 498 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 HOXC13P31276 330 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 SORDQ00796 357 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 GAGE5Q13069 117 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 GAGE6Q13070 117 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 KRT72Q14CN4 511 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 RNPS1Q15287 305 aaKnown RBP4.28□□□□□ -1.72
VBP1-203ENST00000535916 WDR38Q5JTN6 314 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 GGNBP1Q5YKI7 109 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 TXNDC8Q6A555 127 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 OR7E24Q6IFN5 339 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 ZNF280DQ6N043 979 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 DUS1LQ6P1R4 473 aaKnown RBP4.28□□□□□ -1.72
VBP1-203ENST00000535916 RAD9BQ6WBX8 426 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 STPG4Q8N801 248 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 OR52I2Q8NH67 350 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 HMGCLL1Q8TB92 370 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 SLC52A3Q9NQ40 469 aa4.28□□□□□ -1.72
VBP1-203ENST00000535916 BEX4Q9NWD9 120 aaPredicted RBP4.28□□□□□ -1.72
VBP1-203ENST00000535916 IGLV5-45A0A087WSX0 123 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 GOLGA6L10A0A0M3HER8 536 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 ZNHIT1O43257 154 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 GPD2P43304 727 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 RPL24P83731 157 aaKnown RBP4.27□□□□□ -1.73
VBP1-203ENST00000535916 QSOX2Q6ZRP7 698 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 APLFQ8IW19 511 aaPredicted RBP4.27□□□□□ -1.73
VBP1-203ENST00000535916 LINGO1Q96FE5 620 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 STAMBPL1Q96FJ0 436 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 SCRN2Q96FV2 425 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 LRR1Q96L50 414 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 MPHOSPH6Q99547 160 aaKnown RBP4.27□□□□□ -1.73
VBP1-203ENST00000535916 LBHD1Q9BQE6 289 aaPredicted RBP4.27□□□□□ -1.73
VBP1-203ENST00000535916 NEURL2Q9BR09 285 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 ITM2CQ9NQX7 267 aa4.27□□□□□ -1.73
VBP1-203ENST00000535916 MAP3K20Q9NYL2 800 aaKnown RBP4.27□□□□□ -1.73
VBP1-203ENST00000535916 PTPRCP08575 1304 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 HHLA1C9JL84 531 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 PRKNO60260 465 aaPredicted RBP4.26□□□□□ -1.73
VBP1-203ENST00000535916 POLR2CP19387 275 aaPredicted RBP4.26□□□□□ -1.73
VBP1-203ENST00000535916 GRK6P43250 576 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 NAE1Q13564 534 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 ZNF766Q5HY98 468 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 TTI2Q6NXR4 508 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 BRAT1Q6PJG6 821 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 TRIM58Q8NG06 486 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 OR5R1Q8NH85 324 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 SLC38A5Q8WUX1 472 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 TBC1D20Q96BZ9 403 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 RHBDF1Q96CC6 855 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 ORAI1Q96D31 301 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 QRFPRQ96P65 431 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 PYGO2Q9BRQ0 406 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 ACSL5Q9ULC5 683 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 PADI3Q9ULW8 664 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 ERVK-11Q9UQG0 969 aa4.26□□□□□ -1.73
VBP1-203ENST00000535916 KRTAP16-1A8MUX0 517 aa4.25□□□□□ -1.73
VBP1-203ENST00000535916 SYNGR3O43761 229 aa4.25□□□□□ -1.73
VBP1-203ENST00000535916 PRSS56P0CW18 603 aa4.25□□□□□ -1.73
VBP1-203ENST00000535916 ZNF10P21506 573 aaPredicted RBP4.25□□□□□ -1.73
VBP1-203ENST00000535916 NOVP48745 357 aa4.25□□□□□ -1.73
VBP1-203ENST00000535916 CSNK2A1P68400 391 aaPredicted RBP4.25□□□□□ -1.73
VBP1-203ENST00000535916 EFR3AQ14156 821 aa4.25□□□□□ -1.73
VBP1-203ENST00000535916 TMEM35AQ53FP2 167 aa4.25□□□□□ -1.73
VBP1-203ENST00000535916 FBXO47Q5MNV8 452 aa4.25□□□□□ -1.73
VBP1-203ENST00000535916 MAP3K21Q5TCX8 1036 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms