RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 NR1D2Q14995 579 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 LINC00303Q3SY05 128 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 HGSNATQ68CP4 663 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 USP45Q70EL2 814 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 NAGSQ8N159 534 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 NIPA2Q8N8Q9 360 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 RCBTB1Q8NDN9 531 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 ABCG8Q9H221 673 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 SEPT10Q9P0V9 454 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 ANAPC7Q9UJX3 599 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 TMEM98Q9Y2Y6 226 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 BSNQ9UPA5 3926 aa20.53■□□□□ 0.88
LTBR-205ENST00000535739 TLN1Q9Y490 2541 aaKnown RBP20.53■□□□□ 0.88
LTBR-205ENST00000535739 SPTA1P02549 2419 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 SOD1P00441 154 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 SERPINC1P01008 464 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 IVLP07476 585 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 CD48P09326 243 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 CCL4P13236 92 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 IL4RP24394 825 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 CD1CP29017 333 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 DPTQ07507 201 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 ITKQ08881 620 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 BIRC2Q13490 618 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 KRT81Q14533 505 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 MANEAQ5SRI9 462 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 LRRC66Q68CR7 880 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.52■□□□□ 0.88
LTBR-205ENST00000535739 TEX26Q8N6G2 289 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 SEMA3CQ99985 751 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 NUP85Q9BW27 656 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 AKAP7Q9P0M2 348 aaPredicted RBP20.52■□□□□ 0.88
LTBR-205ENST00000535739 IP6K2Q9UHH9 426 aa20.52■□□□□ 0.88
LTBR-205ENST00000535739 IGHV5-10-1A0A0J9YXX1 117 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 PPM1DO15297 605 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 FZD6O60353 706 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 PTSQ03393 145 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 IHHQ14623 411 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 IQCB1Q15051 598 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 FIGNQ5HY92 759 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 NKAIN2Q5VXU1 208 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 TRIM74Q86UV6 250 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 DTX1Q86Y01 620 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 EXTL1Q92935 676 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 SCAMP4Q969E2 229 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 AP2M1Q96CW1 435 aa20.51■□□□□ 0.87
LTBR-205ENST00000535739 SCARF2Q96GP6 870 aaPredicted RBP20.51■□□□□ 0.87
LTBR-205ENST00000535739 ZW10O43264 779 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 MFSD11O43934 449 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 WT1P19544 449 aaPredicted RBP20.5■□□□□ 0.87
LTBR-205ENST00000535739 ACTR1BP42025 376 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 SSR1P43307 286 aaKnown RBP20.5■□□□□ 0.87
LTBR-205ENST00000535739 GPR3P46089 330 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 ACTR1AP61163 376 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 ADAMTSL4Q6UY14 1074 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 MARK2Q7KZI7 788 aaKnown RBP20.5■□□□□ 0.87
LTBR-205ENST00000535739 NDUFAF2Q8N183 169 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 CCDC74BQ96LY2 380 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 OR2M4Q96R27 311 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 AGAP2Q99490 1192 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 CDH19Q9H159 772 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 PCDHB11Q9Y5F2 797 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 PCDHGA4Q9Y5G9 962 aa20.5■□□□□ 0.87
LTBR-205ENST00000535739 BZW2Q9Y6E2 419 aaKnown RBP20.5■□□□□ 0.87
LTBR-205ENST00000535739 A0A0J9YYE9 177 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 HGSO14964 777 aaPredicted RBP20.49■□□□□ 0.87
LTBR-205ENST00000535739 SLC28A2O43868 658 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 MAP3K6O95382 1288 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 TRBC1P01850 177 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 CYP1A2P05177 515 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 FGF3P11487 239 aaPredicted RBP20.49■□□□□ 0.87
LTBR-205ENST00000535739 GARSP41250 739 aaKnown RBP20.49■□□□□ 0.87
LTBR-205ENST00000535739 DSC2Q02487 901 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 NFATC3Q12968 1075 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 CLPPQ16740 277 aaPredicted RBP20.49■□□□□ 0.87
LTBR-205ENST00000535739 ATP13A4Q4VNC1 1196 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 TMEM164Q5U3C3 297 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 GAS2L3Q86XJ1 694 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 CPNE8Q86YQ8 564 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 LRRC49Q8IUZ0 686 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 FAM71BQ8TC56 605 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 JPH3Q8WXH2 748 aaPredicted RBP20.49■□□□□ 0.87
LTBR-205ENST00000535739 PMEPA1Q969W9 287 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 POLR1EQ9GZS1 481 aaKnown RBP20.49■□□□□ 0.87
LTBR-205ENST00000535739 CBX8Q9HC52 389 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 RCOR3Q9P2K3 495 aaPredicted RBP20.49■□□□□ 0.87
LTBR-205ENST00000535739 CHKBQ9Y259 395 aa20.49■□□□□ 0.87
LTBR-205ENST00000535739 TRBV23OR9-2A0A075B6M9 112 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 IGHV1OR21-1A0A087WYE8 117 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 A0A087X0T9 212 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 A0A1W2PQJ5 194 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 MYO1FO00160 1098 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 FAM228BP0C875 321 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 MPSTP25325 297 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 CD82P27701 267 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 GJC1P36383 396 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 ARSEP51690 589 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 LIMK2P53671 638 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 EPHB1P54762 984 aa20.48■□□□□ 0.87
LTBR-205ENST00000535739 CYP4F2P78329 520 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms