RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 OTOP3Q7RTS5 596 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 NDUFAF2Q8N183 169 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 ELMOD1Q8N336 334 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 CADM2Q8N3J6 435 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 C8orf48Q96LL4 319 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 OLFM1Q99784 485 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 HIPK3Q9H422 1215 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 PNPLA3Q9NST1 481 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 WBP1LQ9NX94 342 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 NCKIPSDQ9NZQ3 722 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 CENPXA8MT69 81 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 KCNN4O15554 427 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 SCO1O75880 301 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 EIF2S1P05198 315 aaKnown RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 GALTP07902 379 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 ZXDBP98169 803 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 IL1RL1Q01638 556 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 YWHAHQ04917 246 aaPredicted RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 FCHO2Q0JRZ9 810 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 TUBA3CQ13748 450 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 KCNJ11Q14654 390 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 MROH9Q5TGP6 573 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 RWDD4Q6NW29 188 aaKnown RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 C16orf46Q6P387 395 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 TTC23LQ6PF05 361 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 DCLRE1AQ6PJP8 1040 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 PIWIL3Q7Z3Z3 882 aaKnown RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 TMEM246Q9BRR3 403 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 EFHD1Q9BUP0 239 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 POPDC2Q9HBU9 364 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 TOR4AQ9NXH8 423 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 ERGIC3Q9Y282 383 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 IFT52Q9Y366 437 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 CCDC162PA2VCL2 907 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CLDN25C9JDP6 229 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 DCLK1O15075 740 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CABYRO75952 493 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ODC1P11926 461 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 STMN1P16949 149 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 FMO4P31512 558 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 LHX1P48742 406 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 VAC14Q08AM6 782 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 HNRNPDQ14103 355 aaKnown RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 BCL2A1Q16548 175 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 KLHL38Q2WGJ6 581 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 LGSNQ5TDP6 509 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 AGAP9Q5VTM2 703 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 SNX32Q86XE0 403 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 FAM9CQ8IZT9 166 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 PDIK1LQ8N165 341 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 BRSK1Q8TDC3 778 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 GIPC2Q8TF65 315 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CELF6Q96J87 481 aaKnown RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 BIRC8Q96P09 236 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ACAT2Q9BWD1 397 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 MAGEE1Q9HCI5 957 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ACSS2Q9NR19 701 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 VPS45Q9NRW7 570 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 MAT2BQ9NZL9 334 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 LGALS13Q9UHV8 139 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ATPIF1Q9UII2 106 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 MAGED2Q9UNF1 606 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 DRG1Q9Y295 367 aaKnown RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 TTLL3Q9Y4R7 772 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CXorf49A8MYA2 514 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 KCNK1O00180 336 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 KMOO15229 486 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CLOCKO15516 846 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 PRPF4O43172 522 aaKnown RBP eCLIP9.03□□□□□ -0.962e-9■□□□□ 10
SF3B2-216ENST00000534765 SNX2O60749 519 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 NDUFS2O75306 463 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 SEC24AO95486 1093 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 HSPA4LO95757 839 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 TOP3BO95985 862 aaKnown RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 LTFP02788 710 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CSF2RAP15509 400 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ALOX12P18054 663 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 PPP2R2BQ00005 443 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 MOGQ16653 247 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 GPR180Q86V85 440 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CIR1Q86X95 450 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ASCC1Q8N9N2 400 aaKnown RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 FBXO36Q8NEA4 188 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 KLHL32Q96NJ5 620 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CTRCQ99895 268 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 VPS11Q9H270 941 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 SP140LQ9H930 580 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 MRPL40Q9NQ50 206 aaKnown RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 DDIT4Q9NX09 232 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 KCNK4Q9NYG8 393 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 WDR27A2RRH5 827 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 KBTBD13C9JR72 458 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ARHGEF15O94989 841 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 OAZ2O95190 189 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ZNF135P52742 658 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ADGRE1Q14246 886 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 PLA2G4EQ3MJ16 856 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ZFP69Q49AA0 526 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 RNF111Q6ZNA4 994 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms