RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 KCTD3Q9Y597 815 aa13.98□□□□□ -0.17
VPS11-205ENST00000534551 CNOT1A5YKK6 2376 aaKnown RBP13.98□□□□□ -0.17
VPS11-205ENST00000534551 ARHGEF17Q96PE2 2063 aaPredicted RBP13.98□□□□□ -0.17
VPS11-205ENST00000534551 PCNX2A6NKB5 2137 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 COL5A1P20908 1838 aaPredicted RBP13.97□□□□□ -0.17
VPS11-205ENST00000534551 SPTY2D1-AS1A0A0U1RR47 76 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 CCDC78A2IDD5 438 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 CCL22O00626 93 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 CES2O00748 559 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 SH3BP5O60239 455 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 AP2A1O95782 977 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 BPIP17213 487 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 TPH1P17752 444 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 CA5AP35218 305 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 COILP38432 576 aaPredicted RBP13.97□□□□□ -0.17
VPS11-205ENST00000534551 TNNT3P45378 269 aaPredicted RBP13.97□□□□□ -0.17
VPS11-205ENST00000534551 GPR1P46091 355 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 MSLNQ13421 630 aaPredicted RBP13.97□□□□□ -0.17
VPS11-205ENST00000534551 HENMT1Q5T8I9 393 aaKnown RBP13.97□□□□□ -0.17
VPS11-205ENST00000534551 CCDC70Q6NSX1 233 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 KANSL1Q7Z3B3 1105 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 TMC3Q7Z5M5 1100 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 CREG2Q8IUH2 290 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 OR52K1Q8NGK4 314 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 OR1E3Q8WZA6 343 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 SKA1Q96BD8 255 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 DLL3Q9NYJ7 618 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 PKD2L2Q9NZM6 624 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 PAK5Q9P286 719 aa13.97□□□□□ -0.17
VPS11-205ENST00000534551 PCYT1BQ9Y5K3 369 aaPredicted RBP13.97□□□□□ -0.17
VPS11-205ENST00000534551 OAS3Q9Y6K5 1087 aaKnown RBP13.97□□□□□ -0.17
VPS11-205ENST00000534551 TCRBV7S3A2A0A539 114 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 TM4SF5O14894 197 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 FFAR2O15552 330 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 MAGEC1O60732 1142 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 ZNF189O75820 626 aaPredicted RBP13.96□□□□□ -0.17
VPS11-205ENST00000534551 EPOP01588 193 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 APRTP07741 180 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 NME1P15531 152 aaKnown RBP13.96□□□□□ -0.17
VPS11-205ENST00000534551 TSHRP16473 764 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 JUNDP17535 347 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 STIP1P31948 543 aaKnown RBP13.96□□□□□ -0.17
VPS11-205ENST00000534551 POLD2P49005 469 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 ETF1P62495 437 aaKnown RBP13.96□□□□□ -0.17
VPS11-205ENST00000534551 BASP1P80723 227 aaKnown RBP13.96□□□□□ -0.17
VPS11-205ENST00000534551 SEMA5AQ13591 1074 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 ZNF648Q5T619 568 aaPredicted RBP13.96□□□□□ -0.17
VPS11-205ENST00000534551 CCDC137Q6PK04 289 aaKnown RBP13.96□□□□□ -0.17
VPS11-205ENST00000534551 ENPP7Q6UWV6 458 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 RD3Q7Z3Z2 195 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 HID1Q8IV36 788 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 NAXDQ8IW45 347 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 PHACTR4Q8IZ21 702 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 ZNF548Q8NEK5 533 aaPredicted RBP13.96□□□□□ -0.17
VPS11-205ENST00000534551 CCHCR1Q8TD31 782 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 SAP25Q8TEE9 199 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 WDR92Q96MX6 357 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 LRRC61Q9BV99 259 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 LRRC40Q9H9A6 602 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 ERVMER34-1Q9H9K5 563 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 DRG1Q9Y295 367 aaKnown RBP13.96□□□□□ -0.17
VPS11-205ENST00000534551 SAR1BQ9Y6B6 198 aa13.96□□□□□ -0.17
VPS11-205ENST00000534551 GOLGA4Q13439 2230 aaKnown RBP13.95□□□□□ -0.18
VPS11-205ENST00000534551 E7EVH7 732 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 GAPDHSO14556 408 aaPredicted RBP13.95□□□□□ -0.18
VPS11-205ENST00000534551 PIAS2O75928 621 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 ZNF883P0CG24 379 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 MYCLP1P12525 358 aaPredicted RBP13.95□□□□□ -0.18
VPS11-205ENST00000534551 ACTN2P35609 894 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 FDFT1P37268 417 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 RXRGP48443 463 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 LMAN1P49257 510 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 KIAA1024LP59773 190 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 YPEL5P62699 121 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 TMPRSS15P98073 1019 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 DPTQ07507 201 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 C1orf61Q13536 156 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 SEPT6Q14141 434 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 POU6F1Q14863 301 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 ANKRD22Q5VYY1 191 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 FAM151BQ6UXP7 276 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 ZNF765Q7L2R6 523 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 KLHL7Q8IXQ5 586 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 NRSN1Q8IZ57 195 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 OR13C4Q8NGS5 318 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 SETD7Q8WTS6 366 aaKnown RBP13.95□□□□□ -0.18
VPS11-205ENST00000534551 NAP1L3Q99457 506 aaPredicted RBP13.95□□□□□ -0.18
VPS11-205ENST00000534551 TEX101Q9BY14 249 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 KLQ9UEF7 1012 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 APOBEC3BQ9UH17 382 aaKnown RBP13.95□□□□□ -0.18
VPS11-205ENST00000534551 MOSPD1Q9UJG1 213 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 CNOT6Q9ULM6 557 aaKnown RBP13.95□□□□□ -0.18
VPS11-205ENST00000534551 TMEM98Q9Y2Y6 226 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 NEU2Q9Y3R4 380 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 SPTBN2O15020 2390 aa13.95□□□□□ -0.18
VPS11-205ENST00000534551 GOLGA6L10A0A0M3HER8 536 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 CACNB4O00305 520 aaPredicted RBP13.94□□□□□ -0.18
VPS11-205ENST00000534551 MTX2O75431 263 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 TMEM63AO94886 807 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 KRT14P02533 472 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms