RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 RTP4Q96DX8 246 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 AJUBAQ96IF1 538 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 TSPAN18Q96SJ8 248 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 PAFAH2Q99487 392 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 CNPY3Q9BT09 278 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 TCHPQ9BT92 498 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 NDC1Q9BTX1 674 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 CCDC28BQ9BUN5 200 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 KIFC3Q9BVG8 833 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 MAK16Q9BXY0 300 aaKnown RBP4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 GCOM2Q9BZD3 368 aaPredicted RBP4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 GLIS2Q9BZE0 524 aaPredicted RBP4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 TINAGL1Q9GZM7 467 aaPredicted RBP4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 IQCGQ9H095 443 aaKnown RBP4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 KLC2Q9H0B6 622 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 ASB7Q9H672 318 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 APOBEC3GQ9HC16 384 aaKnown RBP4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 NECTIN3Q9NQS3 549 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 VPS45Q9NRW7 570 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 KIF17Q9P2E2 1029 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 IFT80Q9P2H3 777 aaPredicted RBP4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 IGSF9Q9P2J2 1179 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 PDP2Q9P2J9 529 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 TBK1Q9UHD2 729 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 CPSF3Q9UKF6 684 aaKnown RBP4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 DNPEPQ9ULA0 475 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 ZMYND8Q9ULU4 1186 aaPredicted RBP4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 SLC45A2Q9UMX9 530 aa4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 TNS1Q9HBL0 1735 aaKnown RBP4.79□□□□□ -1.64
CYCSP28-201ENST00000534284 A0A087WWL8 130 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 UBE2QL1A1L167 161 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 CDHR4A6H8M9 788 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 TMEM150BA6NC51 233 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 B5MCH6 92 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 POC1B-GALNT4F8VUJ3 575 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 FCHO1O14526 889 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 BIRC5O15392 142 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 ASNA1O43681 348 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 PRPSAP2O60256 369 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 HBP1O60381 514 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 CST8O60676 142 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 DNAJB5O75953 348 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 USP1O94782 785 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 FARP2O94887 1054 aaPredicted RBP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 SLC25A27O95847 323 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 GH1P01241 217 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 IFNB1P01574 187 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 ITGA2BP08514 1039 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 KRT16P08779 473 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 SNRPAP09012 282 aaKnown RBP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 MCF2P10911 925 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 VDRP11473 427 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 TPH1P17752 444 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 KRT4P19013 534 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 PROZP22891 400 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 KDELR1P24390 212 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 ACVR2AP27037 513 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 CSF2RBP32927 897 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 HSPA1LP34931 641 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 GJC1P36383 396 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 NR2C2P49116 596 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 COPAP53621 1224 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 EIF3EP60228 445 aaKnown RBP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 RPL7AP62424 266 aaKnown RBP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 KCNJ2P63252 427 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 OTUD4Q01804 1114 aaKnown RBP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 CNTN2Q02246 1040 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 SLC25A11Q02978 314 aaKnown RBP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 SLC18A2Q05940 514 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 CAPSQ13938 189 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 NAA25Q14CX7 972 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 PKN2Q16513 984 aaKnown RBP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 MLANAQ16655 118 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 FAM187BQ17R55 369 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 DNAL1Q4LDG9 190 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 TMEM63BQ5T3F8 832 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 STXBP5Q5T5C0 1151 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 INTS11Q5TA45 600 aaKnown RBP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 ATF7IP2Q5U623 682 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 FAAH2Q6GMR7 532 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 C3orf62Q6ZUJ4 267 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 ARCQ7LC44 396 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 NLRP9Q7RTR0 991 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 FAM228AQ86W67 206 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 SLC26A11Q86WA9 606 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 LRRC6Q86X45 466 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 RHPN2Q8IUC4 686 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 CDKL3Q8IVW4 592 aaPredicted RBP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 KLHL36Q8N4N3 616 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 GPATCH11Q8N954 259 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 BANPQ8N9N5 519 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 MCUQ8NE86 351 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 ACTL9Q8TC94 416 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 ACMSDQ8TDX5 336 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 AGAP11Q8TF27 550 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 NSMCE1Q8WV22 266 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 C10orf82Q8WW14 230 aa4.78□□□□□ -1.64
CYCSP28-201ENST00000534284 SLC44A1Q8WWI5 657 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms