RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 OR10G6Q8NH81 332 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 NKD2Q969F2 451 aaPredicted RBP11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 PHF21AQ96BD5 680 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 LPIN3Q9BQK8 851 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 TMEM79Q9BSE2 394 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 FBRSQ9HAH7 460 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CHD4Q14839 1912 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 IGKV6-21A0A0C4DH24 114 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 TRIM24O15164 1050 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CCDC166P0CW27 439 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CMPK1P30085 196 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 HSD17B2P37059 387 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CHRNB3Q05901 458 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CSTF3Q12996 717 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 IRF2BP1Q8IU81 584 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CLVS1Q8IUQ0 354 aaPredicted RBP11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 DSELQ8IZU8 1212 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 ZNF248Q8NDW4 579 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 OR6K2Q8NGY2 324 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 HMGB4Q8WW32 186 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 KLHL32Q96NJ5 620 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 ZDHHC7Q9NXF8 308 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 ENOPH1Q9UHY7 261 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 OR10H2O60403 315 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 PCCBP05166 539 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 EIF2S1P05198 315 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 S100A3P33764 101 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CCNFP41002 786 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 ZNF844Q08AG5 666 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 TRIM32Q13049 653 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 ZNF783Q6ZMS7 281 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 AGMOQ6ZNB7 445 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 TMEM132CQ8N3T6 1108 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 PLD5Q8N7P1 536 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 POP5Q969H6 163 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 HMCESQ96FZ2 354 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 POMKQ9H5K3 350 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 IL36AQ9UHA7 158 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 RABGEF1Q9UJ41 708 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 V9GYQ6 96 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CCDC88AQ3V6T2 1871 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 AP2A1O95782 977 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CFIP05156 583 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CTSAP10619 480 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 HOXB2P14652 356 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 ABRQ12979 859 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 TXNDC8Q6A555 127 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 PIWIL4Q7Z3Z4 852 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 NIPA2Q8N8Q9 360 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 GDPD5Q8WTR4 605 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 TTLL2Q9BWV7 592 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 SLC2A11Q9BYW1 496 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 SEMA4AQ9H3S1 761 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 KCND1Q9NSA2 647 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 TMEM216Q9P0N5 145 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 ABI3Q9P2A4 366 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 MTRRQ9UBK8 725 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 TMA7Q9Y2S6 64 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 MRPL42Q9Y6G3 142 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 COMMD3-BMI1R4GMX3 469 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 LINC00854A0A1B0GVQ3 168 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 IPO13O94829 963 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 CSKP41240 450 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 HTRA3P83110 453 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 EIF4HQ15056 248 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 UPP1Q16831 310 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 MRPL10Q7Z7H8 261 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 KBTBD6Q86V97 674 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 OR4K2Q8NGD2 314 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 SLC38A3Q99624 504 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 TNKS2Q9H2K2 1166 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 IKZF4Q9H2S9 585 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 RHOJQ9H4E5 214 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 NOL6Q9H6R4 1146 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 TCF7L2Q9NQB0 619 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 VWA7Q9Y334 891 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 MBLAC1A4D2B0 266 aaPredicted RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 UBXN8O00124 270 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 PLK1P53350 603 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 PUS10Q3MIT2 529 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 GPR33Q49SQ1 333 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 C2orf27AQ580R0 203 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 GDPD4Q6W3E5 623 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 TRMOQ9BU70 441 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 CEP44Q9C0F1 390 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 PIH1D1Q9NWS0 290 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 CD207Q9UJ71 328 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 NOCTQ9UK39 431 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 ACTL7BQ9Y614 415 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 BUD23O43709 281 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 GPR32O75388 356 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 COL6A2P12110 1019 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 TFE3P19532 575 aaPredicted RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 TIE1P35590 1138 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 PBX1P40424 430 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 SLC1A6P48664 564 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 MLLT1Q03111 559 aaPredicted RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 FBXO43Q4G163 708 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 INTS11Q5TA45 600 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 SLC44A2Q8IWA5 706 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms