RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 PLRG1O43660 514 aaKnown RBP8.29□□□□□ -1.08
NEDD8-207ENST00000533242 LZTS3O60299 673 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-207ENST00000533242 IL1BP01584 269 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 LCP1P13796 627 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 RBL1P28749 1068 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 DRD3P35462 400 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 PCK1P35558 622 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 HDAC4P56524 1084 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 ARL4CP56559 192 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 RPS24P62847 133 aaKnown RBP8.29□□□□□ -1.08
NEDD8-207ENST00000533242 GABREP78334 506 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 VAC14Q08AM6 782 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 KCNJ11Q14654 390 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 PDK4Q16654 411 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 FSCBQ5H9T9 825 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 DARS2Q6PI48 645 aaKnown RBP8.29□□□□□ -1.08
NEDD8-207ENST00000533242 LVRNQ6Q4G3 990 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 ADGRD1Q6QNK2 874 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 IGF2-ASQ6U949 168 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 FAM181AQ8N9Y4 354 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 TTC13Q8NBP0 860 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 MYEOVQ96EZ4 313 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 KLHDC7BQ96G42 594 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 NAF1Q96HR8 494 aaKnown RBP8.29□□□□□ -1.08
NEDD8-207ENST00000533242 RNF157Q96PX1 679 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 SMC6Q96SB8 1091 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 SNRNP25Q9BV90 132 aaKnown RBP8.29□□□□□ -1.08
NEDD8-207ENST00000533242 MIS12Q9H081 205 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 POLR1BQ9H9Y6 1135 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 EVA1BQ9NVM1 165 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 SLCO3A1Q9UIG8 710 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 SSUH2Q9Y2M2 353 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 HEY1Q9Y5J3 304 aa8.29□□□□□ -1.08
NEDD8-207ENST00000533242 TDRD6O60522 2096 aaKnown RBP8.29□□□□□ -1.08
NEDD8-207ENST00000533242 FLNBO75369 2602 aaKnown RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 CXorf49A8MYA2 514 aaPredicted RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 PRAMEF26H0Y7S4 382 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 EDF1O60869 148 aaKnown RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 RNGTTO60942 597 aaKnown RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SDC3O75056 442 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 ATP6V1G2O95670 118 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 LTFP02788 710 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 GP1BAP07359 652 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 CKMT1AP12532 417 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 NNMTP40261 264 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 KCNC4Q03721 635 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SLC10A2Q12908 348 aaPredicted RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SLC12A1Q13621 1099 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 KBTBD12Q3ZCT8 623 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SETMARQ53H47 684 aaPredicted RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 DCAF6Q58WW2 860 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 ASRGL1Q7L266 308 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 OTOAQ7RTW8 1153 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 DSG4Q86SJ6 1040 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SLC25A45Q8N413 288 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 ATP11CQ8NB49 1132 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 TCP10LQ8TDR4 215 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 FAM172AQ8WUF8 416 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SLC35F5Q8WV83 523 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 UTP4Q969X6 686 aaKnown RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 MED8Q96G25 268 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SEMA4CQ9C0C4 833 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 MYLK2Q9H1R3 596 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 PCDH18Q9HCL0 1135 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 ASNSD1Q9NWL6 643 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SLC24A2Q9UI40 661 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 TLR6Q9Y2C9 796 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 TEX264Q9Y6I9 313 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 COL6A6A6NMZ7 2263 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 H7C0C1 242 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 KCNN4O15554 427 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 UGT1A9O60656 530 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 CSO75390 466 aaKnown RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 FBXO21O94952 628 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 WISP1O95388 367 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 MPOP05164 745 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 NQO1P15559 274 aaKnown RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 DGKAP23743 735 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 ATP5OP48047 213 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 GBE1Q04446 702 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SULT2A1Q06520 285 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SPARCL1Q14515 664 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SNCBQ16143 134 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 PPP6R3Q5H9R7 873 aaPredicted RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 FAM46CQ5VWP2 391 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SH2D5Q6ZV89 423 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 CAND1Q86VP6 1230 aaKnown RBP8.28□□□□□ -1.08
NEDD8-207ENST00000533242 APCDD1Q8J025 514 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 BANPQ8N9N5 519 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 CCDC110Q8TBZ0 833 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SLC39A13Q96H72 371 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SERPINB11Q96P15 392 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 TMEM237Q96Q45 408 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SLC4A5Q9BY07 1137 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 UGT1A7Q9HAW7 530 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 UGT1A10Q9HAW8 530 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 UGT1A8Q9HAW9 530 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 PREBQ9HCU5 417 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 ASCL3Q9NQ33 180 aa8.28□□□□□ -1.08
NEDD8-207ENST00000533242 SMYD2Q9NRG4 433 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms