RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 ARHGEF18Q6ZSZ5 1173 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 HEATR4Q86WZ0 1026 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 RBFAQ8N0V3 343 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 RASGEF1CQ8N431 466 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 ZNF548Q8NEK5 533 aaPredicted RBP19.79■□□□□ 0.76
CPSF1-209ENST00000532725 OR56A4Q8NGH8 313 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 ATL2Q8NHH9 583 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 MAIP1Q8WWC4 291 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 PBKQ96KB5 322 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 TBATAQ96M53 351 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 PPP1R2P1Q96PQ5 205 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 FICDQ9BVA6 458 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 GPR63Q9BZJ6 419 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 TRABDQ9H4I3 376 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 PHPT1Q9NRX4 125 aaPredicted RBP19.79■□□□□ 0.76
CPSF1-209ENST00000532725 DGKBQ9Y6T7 804 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 NCOR2Q9Y618 2525 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 MED19A0JLT2 244 aaPredicted RBP19.78■□□□□ 0.76
CPSF1-209ENST00000532725 NEMP2A6NFY4 417 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 H3BM21 787 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 TNFSF14O43557 240 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 ATP1A1P05023 1023 aaKnown RBP19.78■□□□□ 0.76
CPSF1-209ENST00000532725 FGF1P05230 155 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 PYGLP06737 847 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 MYCLP1P12525 358 aaPredicted RBP19.78■□□□□ 0.76
CPSF1-209ENST00000532725 KELP23276 732 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 TNNT3P45378 269 aaPredicted RBP19.78■□□□□ 0.76
CPSF1-209ENST00000532725 BLKP51451 505 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 MSLNQ13421 630 aaPredicted RBP19.78■□□□□ 0.76
CPSF1-209ENST00000532725 OLIG2Q13516 323 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 LONRF2Q1L5Z9 754 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 P3H1Q32P28 736 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 HENMT1Q5T8I9 393 aaKnown RBP19.78■□□□□ 0.76
CPSF1-209ENST00000532725 HID1Q8IV36 788 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 GPR26Q8NDV2 337 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 OR1E3Q8WZA6 343 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 FSD1LQ9BXM9 530 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 SLC13A1Q9BZW2 595 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 FGF22Q9HCT0 170 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 TOR4AQ9NXH8 423 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 SPASTQ9UBP0 616 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 KLQ9UEF7 1012 aa19.78■□□□□ 0.76
CPSF1-209ENST00000532725 APOBEC3BQ9UH17 382 aaKnown RBP19.78■□□□□ 0.76
CPSF1-209ENST00000532725 CNOT6Q9ULM6 557 aaKnown RBP19.78■□□□□ 0.76
CPSF1-209ENST00000532725 TTC7AQ9ULT0 858 aaPredicted RBP19.78■□□□□ 0.76
CPSF1-209ENST00000532725 GOLGA6CA6NDK9 693 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 GOLGA6BA6NDN3 693 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 AQP9O43315 295 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 SIGLEC6O43699 453 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 RASGRP1O95267 797 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 LDOC1O95751 146 aaPredicted RBP19.77■□□□□ 0.76
CPSF1-209ENST00000532725 FUCA1P04066 466 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 CEACAM5P06731 702 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 ADRB1P08588 477 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 GOLGA6DP0CG33 693 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 HMGCLP35914 325 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 C1orf61Q13536 156 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 SPARCL1Q14515 664 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 PRRT3Q5FWE3 981 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 DENND5AQ6IQ26 1287 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 RD3Q7Z3Z2 195 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 SLCO6A1Q86UG4 719 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 TTC30BQ8N4P2 665 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 OR4C6Q8NH72 309 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 LMX1AQ8TE12 382 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 APOL2Q9BQE5 337 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 LRRC61Q9BV99 259 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 FRMD8Q9BZ67 464 aaPredicted RBP19.77■□□□□ 0.76
CPSF1-209ENST00000532725 CLPBQ9H078 707 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 CDH19Q9H159 772 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 ARNT2Q9HBZ2 717 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 MRPL40Q9NQ50 206 aaKnown RBP19.77■□□□□ 0.76
CPSF1-209ENST00000532725 GOLGA6AQ9NYA3 693 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 HACD3Q9P035 362 aa19.77■□□□□ 0.76
CPSF1-209ENST00000532725 TNFP01375 233 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 ETS1P14921 441 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 BPIP17213 487 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 MSNP26038 577 aaKnown RBP19.76■□□□□ 0.75
CPSF1-209ENST00000532725 PROX2Q3B8N5 592 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 PRELID2Q8N945 189 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 PDXPQ96GD0 296 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 COX14Q96I36 57 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 MS4A14Q96JA4 679 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 HIC2Q96JB3 615 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 CNDP2Q96KP4 475 aaKnown RBP19.76■□□□□ 0.75
CPSF1-209ENST00000532725 RAD18Q9NS91 495 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 NLGN3Q9NZ94 848 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 NFKBIL1Q9UBC1 381 aaPredicted RBP19.76■□□□□ 0.75
CPSF1-209ENST00000532725 FTSJ1Q9UET6 329 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 SLC17A4Q9Y2C5 497 aa19.76■□□□□ 0.75
CPSF1-209ENST00000532725 FADS2P1A8MWK0 482 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 TPP1O14773 563 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 FFAR2O15552 330 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 USP12O75317 370 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 DKK1O94907 266 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 IFNB1P01574 187 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 DCDC1P59894 354 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 FOXK2Q01167 660 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 PRUNE1Q86TP1 453 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 GLIS1Q8NBF1 620 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms