RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ANGPTL8Q6UXH0 198 aa11.32□□□□□ -0.6
NXF1-211ENST00000531709 SMG8Q8ND04 991 aaKnown RBP11.32□□□□□ -0.6
NXF1-211ENST00000531709 MRGPRX2Q96LB1 330 aa11.32□□□□□ -0.6
NXF1-211ENST00000531709 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
NXF1-211ENST00000531709 MUC3BQ9H195 1237 aa11.32□□□□□ -0.6
NXF1-211ENST00000531709 DNAAF2Q9NVR5 837 aaKnown RBP11.32□□□□□ -0.6
NXF1-211ENST00000531709 SLC27A5Q9Y2P5 690 aa11.32□□□□□ -0.6
NXF1-211ENST00000531709 C16orf96A6NNT2 1141 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 DEAF1O75398 565 aaPredicted RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 SLC22A3O75751 556 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 ARSDP51689 593 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 RPL26P61254 145 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 TRIM16LQ309B1 348 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 BRMS1LQ5PSV4 323 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 TAF2Q6P1X5 1199 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 GLB1LQ6UWU2 654 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 ZDHHC13Q8IUH4 622 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 CPSF7Q8N684 471 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 ZMIZ2Q8NF64 920 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 GTF3C2Q8WUA4 911 aaPredicted RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 CENPNQ96H22 339 aaPredicted RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 LRCH3Q96II8 777 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 CDK15Q96Q40 435 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 GPR63Q9BZJ6 419 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 ZFP14Q9HCL3 533 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 MARCH4Q9P2E8 410 aaPredicted RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 GJD2Q9UKL4 321 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 CDC14AQ9UNH5 594 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 THSD7AQ9UPZ6 1657 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 PRSS51A0A1B0GVH4 220 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 NPEPPSL1A6NEC2 478 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 H0Y626 953 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 TRIM16O95361 564 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 ZBTB11O95625 1053 aaPredicted RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 IDO1P14902 403 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 TPP2P29144 1249 aaPredicted RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 GRM2Q14416 872 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 PCBP1Q15365 356 aaKnown RBP eCLIP11.31□□□□□ -0.6
NXF1-211ENST00000531709 FAM98BQ52LJ0 330 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 TMTC4Q5T4D3 741 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 KCTD8Q6ZWB6 473 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 ERI1Q8IV48 349 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 DCP1BQ8IZD4 617 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 RTL3Q8N8U3 475 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 PTCD2Q8WV60 388 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 OSCP1Q8WVF1 389 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 LRRC58Q96CX6 371 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 PLK2Q9NYY3 685 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 MARCH2Q9P0N8 246 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 EBF1Q9UH73 591 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 PRRC2BQ5JSZ5 2229 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 A0A1W2PPW3 197 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 A8MX80 341 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 M0R3G1 203 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 ENPP3O14638 875 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 HS6ST1O60243 411 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 MAFKO60675 156 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 CNTN5O94779 1100 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 RPS9P46781 194 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 CDKN2DP55273 166 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 HERVK_113P63132 956 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 TRAP1Q12931 704 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 BNIP2Q12982 314 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 BNIP3Q12983 259 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 OTUD1Q5VV17 481 aaPredicted RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 KCTD11Q693B1 232 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 GLYATQ6IB77 296 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 PAQR3Q6TCH7 311 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 TMEM26Q6ZUK4 368 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 GPSM1Q86YR5 675 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 LGI2Q8N0V4 545 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 ATAD1Q8NBU5 361 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 OR4K2Q8NGD2 314 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 C12orf43Q96C57 262 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 MTFMTQ96DP5 389 aaKnown RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 GPR21Q99679 349 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 ERVK-6Q9BXR3 956 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 MIOSQ9NXC5 875 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 SMPD3Q9NY59 655 aaPredicted RBP11.31□□□□□ -0.6
NXF1-211ENST00000531709 SQORQ9Y6N5 450 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 LTBP1Q14766 1721 aa11.31□□□□□ -0.6
NXF1-211ENST00000531709 CCDC162PA2VCL2 907 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 I6L893 689 aaPredicted RBP11.3□□□□□ -0.6
NXF1-211ENST00000531709 PLOD2O00469 737 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 ARPC2O15144 300 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 MAN1A2O60476 641 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 CDK4P11802 303 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 POLD2P49005 469 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 SPESP1Q6UW49 350 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 CILP2Q8IUL8 1156 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 NPLOC4Q8TAT6 608 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 C3orf30Q96M34 536 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 C1QTNF1Q9BXJ1 281 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 OSBPL6Q9BZF3 934 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 OSBPL2Q9H1P3 480 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 HS3ST4Q9Y661 456 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 DGKBQ9Y6T7 804 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 CROCCQ5TZA2 2017 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 F5H5T6 163 aa11.3□□□□□ -0.6
NXF1-211ENST00000531709 GGT5P36269 586 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms