RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 COL27A1Q8IZC6 1860 aaPredicted RBP18.75■□□□□ 0.59
PCNX3-203ENST00000530174 BTNL10A8MVZ5 291 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 CSO75390 466 aaKnown RBP18.75■□□□□ 0.59
PCNX3-203ENST00000530174 FUCA1P04066 466 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 CTNNA1P35221 906 aaKnown RBP18.75■□□□□ 0.59
PCNX3-203ENST00000530174 NAP1L1P55209 391 aaKnown RBP18.75■□□□□ 0.59
PCNX3-203ENST00000530174 PCSK7Q16549 785 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 TEX44Q53QW1 395 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 DOK6Q6PKX4 331 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 KDELC2Q7Z4H8 507 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 NLRP8Q86W28 1048 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 TMEM139Q8IV31 216 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 NRSN1Q8IZ57 195 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 FAM46DQ8NEK8 389 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 PTCD2Q8WV60 388 aaKnown RBP18.75■□□□□ 0.59
PCNX3-203ENST00000530174 P3H4Q92791 437 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 TADA1Q96BN2 335 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 CALR3Q96L12 384 aaKnown RBP18.75■□□□□ 0.59
PCNX3-203ENST00000530174 AGAP2Q99490 1192 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 BAG1Q99933 345 aaPredicted RBP18.75■□□□□ 0.59
PCNX3-203ENST00000530174 CCDC3Q9BQI4 270 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 RIOK2Q9BVS4 552 aaKnown RBP18.75■□□□□ 0.59
PCNX3-203ENST00000530174 SUFUQ9UMX1 484 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 SLC17A4Q9Y2C5 497 aa18.75■□□□□ 0.59
PCNX3-203ENST00000530174 CHD6Q8TD26 2715 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 URB1O60287 2271 aaKnown RBP18.74■□□□□ 0.59
PCNX3-203ENST00000530174 CASC3O15234 703 aaKnown RBP18.74■□□□□ 0.59
PCNX3-203ENST00000530174 CDC25BP30305 580 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 GNPDA1P46926 289 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 POLD2P49005 469 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 VAV2P52735 878 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 WASHC5Q12768 1159 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 SLC14A2Q15849 920 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 PPP2R5EQ16537 467 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 TRIM74Q86UV6 250 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 ZC3H18Q86VM9 953 aaKnown RBP18.74■□□□□ 0.59
PCNX3-203ENST00000530174 SFTPA2Q8IWL1 248 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 RAVER1Q8IY67 606 aaKnown RBP18.74■□□□□ 0.59
PCNX3-203ENST00000530174 GPR156Q8NFN8 814 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 SPATA22Q8NHS9 363 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 CCDC74AQ96AQ1 378 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 TEKT5Q96M29 485 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 HEMGNQ9BXL5 484 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 PCDHA3Q9Y5H8 950 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 CFAP47Q6ZTR5 3102 aa18.74■□□□□ 0.59
PCNX3-203ENST00000530174 B4DGG1 531 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 PJA2O43164 708 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 NOBOXO60393 691 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 MT-CYBP00156 380 aaPredicted RBP18.73■□□□□ 0.59
PCNX3-203ENST00000530174 PYGLP06737 847 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 IVLP07476 585 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 SPINT3P49223 89 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 CDK18Q07002 472 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 ISXQ2M1V0 245 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 OGFOD3Q6PK18 319 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 RBM44Q6ZP01 1051 aaKnown RBP18.73■□□□□ 0.59
PCNX3-203ENST00000530174 BBS12Q6ZW61 710 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 LYSMD3Q7Z3D4 306 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 NRROSQ86YC3 692 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 SPC24Q8NBT2 197 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 CCHCR1Q8TD31 782 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 GPBAR1Q8TDU6 330 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 HIC2Q96JB3 615 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 QKIQ96PU8 341 aaKnown RBP eCLIP18.73■□□□□ 0.59
PCNX3-203ENST00000530174 WDR24Q96S15 920 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 DPEP2Q9H4A9 486 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 TRNAU1APQ9NX07 287 aaKnown RBP18.73■□□□□ 0.59
PCNX3-203ENST00000530174 PKD2L2Q9NZM6 624 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 RABGEF1Q9UJ41 708 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 TMEM98Q9Y2Y6 226 aa18.73■□□□□ 0.59
PCNX3-203ENST00000530174 ARHGEF17Q96PE2 2063 aaPredicted RBP18.73■□□□□ 0.59
PCNX3-203ENST00000530174 DSPP15924 2871 aaKnown RBP18.72■□□□□ 0.59
PCNX3-203ENST00000530174 INPP4BO15327 924 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 MTSS1O43312 755 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 BRINP1O60477 761 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 USP12O75317 370 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 TCEA3O75764 348 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 PIRTP0C851 137 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 CTNNA2P26232 953 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 CD68P34810 354 aaPredicted RBP18.72■□□□□ 0.59
PCNX3-203ENST00000530174 COPS2P61201 443 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 ILF3Q12906 894 aaKnown RBP eCLIP18.72■□□□□ 0.59
PCNX3-203ENST00000530174 KIAA1328Q86T90 577 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 WDR48Q8TAF3 677 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 KIAA1524Q8TCG1 905 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 SCARF2Q96GP6 870 aaPredicted RBP18.72■□□□□ 0.59
PCNX3-203ENST00000530174 COX14Q96I36 57 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 HERPUD2Q9BSE4 406 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 GSDMCQ9BYG8 508 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 FAM83DQ9H4H8 585 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 SYNDIG1Q9H7V2 258 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 UBP1Q9NZI7 540 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 IMPACTQ9P2X3 320 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 GPSM3Q9Y4H4 160 aa18.72■□□□□ 0.59
PCNX3-203ENST00000530174 CELSR3Q9NYQ7 3312 aa18.71■□□□□ 0.59
PCNX3-203ENST00000530174 GRID2IPA4D2P6 1211 aa18.71■□□□□ 0.59
PCNX3-203ENST00000530174 RGSL1A5PLK6 1076 aa18.71■□□□□ 0.59
PCNX3-203ENST00000530174 HACD1B0YJ81 288 aa18.71■□□□□ 0.59
PCNX3-203ENST00000530174 APOC4-APOC2K7ER74 178 aa18.71■□□□□ 0.59
PCNX3-203ENST00000530174 PMPCBO75439 489 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms