RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 CCNL2Q96S94 520 aaPredicted RBP8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 SEMA3CQ99985 751 aa8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 NUP85Q9BW27 656 aa8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 STRADBQ9C0K7 418 aa8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 CBX8Q9HC52 389 aa8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 PHPT1Q9NRX4 125 aaPredicted RBP8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 GOLGA6AQ9NYA3 693 aa8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 TMEM9Q9P0T7 183 aa8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 ANAPC7Q9UJX3 599 aa8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 NENFQ9UMX5 172 aa8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 SLC17A4Q9Y2C5 497 aa8.17□□□□□ -1.1
GPATCH4-214ENST00000529520 TENM4Q6N022 2769 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 IGHV5-10-1A0A0J9YXX1 117 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 A0A0J9YYE9 177 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 NVLO15381 856 aaKnown RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 CLDN7O95471 211 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 TRBC1P01850 177 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 FGF3P11487 239 aaPredicted RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 CYP2A6P11509 494 aaPredicted RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 KELP23276 732 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 GJC1P36383 396 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 HSPA9P38646 679 aaKnown RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 GARSP41250 739 aaKnown RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 MLLT3P42568 568 aaPredicted RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 GPR1P46091 355 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 ZNF135P52742 658 aaPredicted RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 ITKQ08881 620 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 EIF3IQ13347 325 aaKnown RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 DPYSL3Q14195 570 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 NR1D2Q14995 579 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 NFKBIBQ15653 356 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 TDRD12Q587J7 1177 aaKnown RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 ANKRD20A8PQ5CZ79 823 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 ARMC12Q5T9G4 340 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 MARK2Q7KZI7 788 aaKnown RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 ZNF438Q7Z4V0 828 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 DTX1Q86Y01 620 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 ATPAF2Q8N5M1 289 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 PQLC3Q8N755 202 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 ARRDC2Q8TBH0 407 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 TEKT4Q8WW24 435 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 MAML1Q92585 1016 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 EXTL1Q92935 676 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 AP2M1Q96CW1 435 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 TRIM11Q96F44 468 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 SCARF2Q96GP6 870 aaPredicted RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 PACSIN1Q9BY11 444 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 RBM22Q9NW64 420 aaKnown RBP eCLIP8.16□□□□□ -1.12e-8■■■■■ 44.3
GPATCH4-214ENST00000529520 TRNAU1APQ9NX07 287 aaKnown RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 IP6K2Q9UHH9 426 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 ACSL6Q9UKU0 697 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 CNOT6Q9ULM6 557 aaKnown RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 CHKBQ9Y259 395 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 PRKAB1Q9Y478 270 aa8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 OAS3Q9Y6K5 1087 aaKnown RBP8.16□□□□□ -1.1
GPATCH4-214ENST00000529520 A0A1W2PQ67 120 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 A0A1W2PQJ5 194 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 SYCE3A1L190 88 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 CYSRT1A8MQ03 144 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 RHPN2P1A8MT19 583 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 B8ZZF3 427 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 TMX2-CTNND1H3BSU7 103 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 PSMD11O00231 422 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 PDE2AO00408 941 aaPredicted RBP8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 INPP4BO15327 924 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 DNAJC6O75061 913 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 CPNE6O95741 557 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 GYPCP04921 128 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 ATP1A1P05023 1023 aaKnown RBP8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 SERPING1P05155 500 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 HLA-DQB2P05538 268 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 IVLP07476 585 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 MMP2P08253 660 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 LIPCP11150 499 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 CSF2RBP32927 897 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 ACTR1BP42025 376 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 SSR1P43307 286 aaKnown RBP8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 UBASH3AP57075 661 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 ACTR1AP61163 376 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 NFKB2Q00653 900 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 GBE1Q04446 702 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 DPTQ07507 201 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 GALNT2Q10471 571 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 KRT81Q14533 505 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 PAFAH1B3Q15102 231 aaKnown RBP8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 TSR1Q2NL82 804 aaKnown RBP8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 MAP9Q49MG5 647 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 PYCR3Q53H96 274 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 CCDC122Q5T0U0 273 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 ZNF648Q5T619 568 aaPredicted RBP8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 ALKBH5Q6P6C2 394 aaKnown RBP8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 B4GALNT4Q76KP1 1039 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 PIM3Q86V86 326 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 HTR3CQ8WXA8 447 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 SYN2Q92777 582 aaPredicted RBP8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 EID2BQ96D98 161 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 MED8Q96G25 268 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 COX14Q96I36 57 aa8.15□□□□□ -1.1
GPATCH4-214ENST00000529520 CCDC74BQ96LY2 380 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms