RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 ZNF280DQ6N043 979 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 WFIKKN2Q8TEU8 576 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 TANKQ92844 425 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 SKA1Q96BD8 255 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 ARHGEF26Q96DR7 871 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 GRAMD2BQ96HH9 432 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 TMEM68Q96MH6 324 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 CTAGE1Q96RT6 745 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 ACOX2Q99424 681 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 SH3GL2Q99962 352 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 PCGF1Q9BSM1 259 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 C1QTNF4Q9BXJ3 329 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 MUC13Q9H3R2 512 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 SEBOXQ9HB31 216 aaPredicted RBP4.34□□□□□ -1.71
SOX6-212ENST00000529469 DIAPH3Q9NSV4 1193 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 ZNF224Q9NZL3 707 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 KCNS2Q9ULS6 477 aa4.34□□□□□ -1.71
SOX6-212ENST00000529469 TTC7AQ9ULT0 858 aaPredicted RBP4.34□□□□□ -1.71
SOX6-212ENST00000529469 WDR81Q562E7 1941 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 LIPT2A6NK58 231 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 KRTAP29-1A8MX34 341 aaPredicted RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 AKR1B15C9JRZ8 316 aaPredicted RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 F5H0A9 414 aaPredicted RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 ACOT8O14734 319 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 BAIAP3O94812 1187 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 DDNO94850 711 aaPredicted RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 SCGB1D1O95968 90 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 EGFP01133 1207 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 EIF2S1P05198 315 aaKnown RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 TGFB3P10600 412 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 BDKRB2P30411 391 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 MAPK4P31152 587 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 GEMIN4P57678 1058 aaKnown RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 ECT2LQ008S8 904 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 EEF1A2Q05639 463 aaKnown RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 LMOD3Q0VAK6 560 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 TNFAIP1Q13829 316 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 RGMBQ6NW40 437 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 DUS1LQ6P1R4 473 aaKnown RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 NCEH1Q6PIU2 408 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 CCNI2Q6ZMN8 369 aaPredicted RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 ARHGAP12Q8IWW6 846 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 PCDH20Q8N6Y1 951 aaKnown RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 RHBDF1Q96CC6 855 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 FAM84BQ96KN1 310 aaPredicted RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 ZHX3Q9H4I2 956 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 DDX31Q9H8H2 851 aaKnown RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 RANGRFQ9HD47 186 aaPredicted RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 ACSS1Q9NUB1 689 aaPredicted RBP4.33□□□□□ -1.72
SOX6-212ENST00000529469 SMARCAL1Q9NZC9 954 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 PROCRQ9UNN8 238 aa4.33□□□□□ -1.72
SOX6-212ENST00000529469 C1orf226A1L170 272 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 PI4KAP2A4QPH2 592 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 SMTNL1A8MU46 457 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 RNASEH2AO75792 299 aaKnown RBP4.32□□□□□ -1.72
SOX6-212ENST00000529469 CLCNKAP51800 687 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 SETQ01105 290 aaPredicted RBP4.32□□□□□ -1.72
SOX6-212ENST00000529469 SIM2Q14190 667 aaPredicted RBP4.32□□□□□ -1.72
SOX6-212ENST00000529469 MAPRE1Q15691 268 aaKnown RBP4.32□□□□□ -1.72
SOX6-212ENST00000529469 KRT24Q2M2I5 525 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 KIF19Q2TAC6 998 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 SIGIRRQ6IA17 410 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 SEPT14Q6ZU15 432 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 ODF3L1Q8IXM7 274 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 NGEFQ8N5V2 710 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 PDILTQ8N807 584 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 ZNF441Q8N8Z8 693 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 HMGCLL1Q8TB92 370 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 DUSP19Q8WTR2 217 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 ARHGEF2Q92974 986 aaKnown RBP4.32□□□□□ -1.72
SOX6-212ENST00000529469 ORAI1Q96D31 301 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 BICD1Q96G01 975 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 TMEM19Q96HH6 336 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 ZNF385AQ96PM9 386 aaKnown RBP4.32□□□□□ -1.72
SOX6-212ENST00000529469 PCYT2Q99447 389 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 PDZD7Q9H5P4 517 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 RRP7BPQ9NSQ0 103 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 MCM9Q9NXL9 1143 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 EHD2Q9NZN4 543 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 CORO1CQ9ULV4 474 aaPredicted RBP4.32□□□□□ -1.72
SOX6-212ENST00000529469 PADI3Q9ULW8 664 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 MAU2Q9Y6X3 613 aa4.32□□□□□ -1.72
SOX6-212ENST00000529469 TCF20Q9UGU0 1960 aaKnown RBP4.31□□□□□ -1.72
SOX6-212ENST00000529469 A0A1B0GUV1 79 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 MAGEA13PA6NCF6 341 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 ZNF587BE7ETH6 402 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 SLC16A5O15375 505 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 SLC25A12O75746 678 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 DDX58O95786 925 aaKnown RBP4.31□□□□□ -1.72
SOX6-212ENST00000529469 HOXB6P17509 224 aaKnown RBP4.31□□□□□ -1.72
SOX6-212ENST00000529469 HOXC9P31274 260 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 RRP1P56182 461 aaKnown RBP4.31□□□□□ -1.72
SOX6-212ENST00000529469 CSNK2A1P68400 391 aaPredicted RBP4.31□□□□□ -1.72
SOX6-212ENST00000529469 NIPAL4Q0D2K0 466 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 KCNT1Q5JUK3 1230 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 FRG2Q64ET8 278 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 KRBA2Q6ZNG9 492 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 CACNA2D4Q7Z3S7 1137 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 SATL1Q86VE3 508 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 ZNF34Q8IZ26 560 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms