RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PSMD7P51665 324 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CTBSQ01459 385 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 ACAP2Q15057 778 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 PLCL1Q15111 1095 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 FUT11Q495W5 492 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 KIAA0930Q6ICG6 404 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 HACD2Q6Y1H2 254 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 Q6ZNX1 250 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 TMEM26Q6ZUK4 368 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CHST15Q7LFX5 561 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 SLC15A3Q8IY34 581 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CMTR2Q8IYT2 770 aaKnown RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 RNF168Q8IYW5 571 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 PACRGLQ8N7B6 248 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 KLHDC9Q8NEP7 349 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 OR52K2Q8NGK3 314 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 GABPB2Q8TAK5 448 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CALML6Q8TD86 181 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 MAGEE2Q8TD90 523 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 TUBGCP3Q96CW5 907 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CENPNQ96H22 339 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 RPL10LQ96L21 214 aaKnown RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 HOPXQ9BPY8 73 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 NPLQ9BXD5 320 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 GSTO2Q9H4Y5 243 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 MID1IP1Q9NPA3 183 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 GID8Q9NWU2 228 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 MAP10Q9P2G4 905 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 AQP12BA6NM10 295 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 EI24O14681 340 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 MT-ND1P03886 318 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 ITGB1P05556 798 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 GPX3P22352 226 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 YAP1P46937 504 aaKnown RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 KCNC1P48547 511 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 C21orf59P57076 290 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CBX3Q13185 183 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 INTS11Q5TA45 600 aaKnown RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 DHRS4L2Q6PKH6 230 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 ABRAXAS1Q6UWZ7 409 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 TAC4Q86UU9 113 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 SERINC5Q86VE9 423 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 EPHX4Q8IUS5 362 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 AQP12AQ8IXF9 295 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CLYBLQ8N0X4 340 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 MIER2Q8N344 545 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 MFSD2AQ8NA29 543 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 DNAJB14Q8TBM8 379 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 HDAC10Q969S8 669 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 PCED1BQ96HM7 432 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 TSGA13Q96PP4 275 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 SLC39A8Q9C0K1 460 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 SOX17Q9H6I2 414 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 HLA-DQB2P05538 268 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 MTHFD1P11586 935 aaKnown RBP12.48□□□□□ -0.41
CAPN1-208ENST00000527323 CYP2C18P33260 490 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 CCR3P51677 355 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 CLCN5P51795 746 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 CRYBB1P53674 252 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-208ENST00000527323 ELMSAN1Q6PJG2 1045 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 KCTD8Q6ZWB6 473 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 LYSMD3Q7Z3D4 306 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 DDHD1Q8NEL9 900 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 SENP8Q96LD8 212 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 MUC3BQ9H195 1237 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 TBCCD1Q9NVR7 557 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 PKD2L2Q9NZM6 624 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 DOLKQ9UPQ8 538 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 CRYL1Q9Y2S2 319 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 PPP6CO00743 305 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 DLGAP1O14490 977 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 CKBP12277 381 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 OXTRP30559 389 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 CLCNKBP51801 687 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 WNT3AP56704 352 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 RAB39AQ14964 217 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 FGD3Q5JSP0 725 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 LRRC43Q8N309 656 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 LZTR1Q8N653 840 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 C3orf58Q8NDZ4 430 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 ZMIZ2Q8NF64 920 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
CAPN1-208ENST00000527323 PRKD2Q9BZL6 878 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 PIF1Q9H611 641 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 RPF2Q9H7B2 306 aaKnown RBP12.48□□□□□ -0.41
CAPN1-208ENST00000527323 PRDM5Q9NQX1 630 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-208ENST00000527323 AGPAT4Q9NRZ5 378 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 TREX1Q9NSU2 369 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 FAM105AQ9NUU6 356 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 PRG3Q9Y2Y8 225 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-208ENST00000527323 SCN10AQ9Y5Y9 1956 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 BBIP1A8MTZ0 92 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 MATN3O15232 486 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 B4GALT3O60512 393 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 CRCPO75575 148 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 CCL5P13501 91 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 NCK1P16333 377 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 BRCC3P46736 316 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 ATP6V0D1P61421 351 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 BNIP3Q12983 259 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms