RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	CHST12	Q9NRB3	414 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	IARS2	Q9NSE4	1012 aa	Known RBP	3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TBC1D22B	Q9NU19	505 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	THG1L	Q9NWX6	298 aa	Known RBP	3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SNTG2	Q9NY99	539 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ATP10D	Q9P241	1426 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PI4KB	Q9UBF8	816 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	EXTL2	Q9UBQ6	330 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RSL24D1	Q9UHA3	163 aa	Known RBP	3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ENOPH1	Q9UHY7	261 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	MSRA	Q9UJ68	235 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CPSF3	Q9UKF6	684 aa	Known RBP	3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TMPRSS11E	Q9UL52	423 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CLEC4A	Q9UMR7	237 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	NFU1	Q9UMS0	254 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SNX12	Q9UMY4	172 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	DUSP12	Q9UNI6	340 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ANKRD26	Q9UPS8	1709 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	WBP11	Q9Y2W2	641 aa	Known RBP	3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RRP7A	Q9Y3A4	280 aa	Known RBP	3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CBY1	Q9Y3M2	126 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SNX14	Q9Y5W7	946 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CEPT1	Q9Y6K0	416 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CARMIL3	Q8ND23	1372 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RTL9	Q8NET4	1388 aa		3.74	□□□□□ -1.81
CLNS1A-209	ENST00000527299	USP32	Q8NFA0	1604 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CC2D2A	Q9P2K1	1620 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	GLI2	P10070	1586 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	BICRA	Q9NZM4	1560 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	MYH10	P35580	1976 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TRAPPC8	Q9Y2L5	1435 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299		A0A1B0GTW7	788 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ARHGEF37	A1IGU5	675 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PRSS38	A1L453	326 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	HEATR9	A2RTY3	570 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ZNF98	A6NK75	572 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PCP4L1	A6NKN8	68 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	C16orf96	A6NNT2	1141 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299		A8MVJ9	347 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SLCO1B7	G3V0H7	640 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	STMND1	H3BQB6	276 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299		K7ENM7	598 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TAF4	O00268	1085 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TOR1A	O14656	332 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	MSI1	O43347	362 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	DENR	O43583	198 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	KRT86	O43790	486 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PRAMEF4	O60810	478 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ENTPD5	O75356	428 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PTP4A3	O75365	173 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TOM1L1	O75674	476 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	KRT36	O76013	467 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	INMT	O95050	263 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ZWINT	O95229	277 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TNFAIP8	O95379	198 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	BMP10	O95393	424 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PIGN	O95427	931 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	AGT	P01019	485 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ATP5B	P06576	529 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CD48	P09326	243 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SLC2A3	P11169	496 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ITIH1	P19827	911 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CCNE1	P24864	410 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PBLD	P30039	288 aa	Predicted RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PRDX6	P30041	224 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	HLA-F	P30511	346 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CTNNA1	P35221	906 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	IDUA	P35475	653 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	GARS	P41250	739 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CD86	P42081	329 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PAFAH1B1	P43034	410 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	OR3A3	P47888	321 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ATP5O	P48047	213 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ALDH3B2	P48448	385 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CARS	P49589	748 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CASP5	P51878	434 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RAP1GDS1	P52306	607 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	NKX2-5	P52952	324 aa	Predicted RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PDE1A	P54750	535 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	HADHB	P55084	474 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	STX17	P56962	302 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CLRN1	P58418	232 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ERVK-21	P61565	698 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CSNK2B	P67870	215 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	EEF1A1	P68104	462 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	IRX4	P78413	519 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SSBP2	P81877	361 aa	Predicted RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	EEF1A2	Q05639	463 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RNASEL	Q05823	741 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	BAMBI	Q13145	260 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TRPC3	Q13507	836 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PDE1C	Q14123	709 aa	Predicted RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	DHX34	Q14147	1143 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SELPLG	Q14242	412 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ERV3-1	Q14264	604 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	GALNT3	Q14435	633 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RRS1	Q15050	365 aa	Known RBP	3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PDK3	Q15120	406 aa		3.73	□□□□□ -1.81
CLNS1A-209	ENST00000527299	UAP1	Q16222	522 aa	Predicted RBP	3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms