RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 IL1BP01584 269 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 ABL2P42684 1182 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 SERPINB8P50452 374 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 ZNF805Q5CZA5 627 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 LRRC73Q5JTD7 316 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 SIX5Q8N196 739 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 TMIEQ8NEW7 156 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 PIP4K2CQ8TBX8 421 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 ISL2Q96A47 359 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 KDM4CQ9H3R0 1056 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 MTF2Q9Y483 593 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-203ENST00000527275 A0A0J9YYE9 177 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 TRBC1P01850 177 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 ARNTP27540 789 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 MAGEA12P43365 314 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 ABCG1P45844 678 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 KIAA0930Q6ICG6 404 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-203ENST00000527275 BRAT1Q6PJG6 821 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 TRPM8Q7Z2W7 1104 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 CMC1Q7Z7K0 106 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 CNTN4Q8IWV2 1026 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 ZNF687Q8N1G0 1237 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 MDGA1Q8NFP4 955 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 BRSK1Q8TDC3 778 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 THOC1Q96FV9 657 aaKnown RBP18.76■□□□□ 0.59
SMPD1-203ENST00000527275 ARL5AQ9Y689 179 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 A0A1W2PQF6 199 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 LDB2O43679 373 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 CHRNB1P11230 501 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 HOXB2P14652 356 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 THOC5Q13769 683 aaKnown RBP18.75■□□□□ 0.59
SMPD1-203ENST00000527275 UGP2Q16851 508 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 INSCQ1MX18 579 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 N4BP2L1Q5TBK1 243 aaPredicted RBP18.75■□□□□ 0.59
SMPD1-203ENST00000527275 C16orf46Q6P387 395 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 TRMT11Q7Z4G4 463 aaKnown RBP18.75■□□□□ 0.59
SMPD1-203ENST00000527275 CACUL1Q86Y37 369 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 NUDCD3Q8IVD9 361 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 TRIM42Q8IWZ5 723 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 UBALD2Q8IYN6 164 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 VPS39Q96JC1 886 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 MECRQ9BV79 373 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 TSSK1BQ9BXA7 367 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.75■□□□□ 0.59
SMPD1-203ENST00000527275 C16orf96A6NNT2 1141 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 A8MX80 341 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 KLF11O14901 512 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 BUD23O43709 281 aaKnown RBP18.75■□□□□ 0.59
SMPD1-203ENST00000527275 AHSGP02765 367 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 TARSP26639 723 aaKnown RBP18.75■□□□□ 0.59
SMPD1-203ENST00000527275 STARD6P59095 220 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 POLR2LP62875 67 aaKnown RBP18.75■□□□□ 0.59
SMPD1-203ENST00000527275 SEMG2Q02383 582 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 TSTD2Q5T7W7 516 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 Q6ZS52 159 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 DSG4Q86SJ6 1040 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 TTC7BQ86TV6 843 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 ZC3HC1Q86WB0 502 aaKnown RBP18.75■□□□□ 0.59
SMPD1-203ENST00000527275 SCRN2Q96FV2 425 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 NECAB3Q96P71 396 aaPredicted RBP18.75■□□□□ 0.59
SMPD1-203ENST00000527275 POLR3BQ9NW08 1133 aaPredicted RBP18.75■□□□□ 0.59
SMPD1-203ENST00000527275 KCTD3Q9Y597 815 aa18.75■□□□□ 0.59
SMPD1-203ENST00000527275 A0A1W2PQ67 120 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 MROH6A6NGR9 719 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 MYO1CO00159 1063 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 BIRC5O15392 142 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 MPOP05164 745 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 BPGMP07738 259 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 HNF1BP35680 557 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 HADHAP40939 763 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 IRX4P78413 519 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 SATB1Q01826 763 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 CTBP1Q13363 440 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 STARD3Q14849 445 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 GLT6D1Q7Z4J2 308 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 DENND6AQ8IWF6 608 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 SHDQ96IW2 340 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 MKRN2Q9H000 416 aaKnown RBP18.74■□□□□ 0.59
SMPD1-203ENST00000527275 RSPH9Q9H1X1 276 aaPredicted RBP18.74■□□□□ 0.59
SMPD1-203ENST00000527275 RHOJQ9H4E5 214 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 CAB39LQ9H9S4 337 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 MAGEE1Q9HCI5 957 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 SIRPGQ9P1W8 387 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 DKK3Q9UBP4 350 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 EMCNQ9ULC0 261 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 KANSL1LA0AUZ9 987 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 TSPAN11A1L157 253 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 NPIPB15A6NHN6 443 aaPredicted RBP18.74■□□□□ 0.59
SMPD1-203ENST00000527275 SLC4A1P02730 911 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 GABRB3P28472 473 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 PSMD8P48556 350 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 PTPRCAPQ14761 206 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 UBXN2BQ14CS0 331 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 LACTB2Q53H82 288 aaPredicted RBP18.74■□□□□ 0.59
SMPD1-203ENST00000527275 PARS2Q7L3T8 475 aaKnown RBP18.74■□□□□ 0.59
SMPD1-203ENST00000527275 FOXQ1Q9C009 403 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 ABCF3Q9NUQ8 709 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 MRPS17Q9Y2R5 130 aaKnown RBP18.74■□□□□ 0.59
SMPD1-203ENST00000527275 PPIL1Q9Y3C6 166 aa18.74■□□□□ 0.59
SMPD1-203ENST00000527275 CAPN8A6NHC0 703 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms