RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 AKTIPQ9H8T0 292 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 ZNF840PA6NDX5 716 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 INSIG1O15503 277 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 COCHO43405 550 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 AOC2O75106 756 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 F11P03951 625 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 GPX3P22352 226 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 SLC11A2P49281 568 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 CDKN1CP49918 316 aaPredicted RBP17.53■□□□□ 0.4
USH1C-205ENST00000527020 ATP4BP51164 291 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 OXCT1P55809 520 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 CYTH1Q15438 398 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 NPAS4Q8IUM7 802 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 PHYKPLQ8IUZ5 450 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 BBS5Q8N3I7 341 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 TDRD1Q9BXT4 1180 aaKnown RBP17.53■□□□□ 0.4
USH1C-205ENST00000527020 PCDHAC1Q9H158 963 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 RETREG1Q9H6L5 497 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 MID1IP1Q9NPA3 183 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 A0A1B0GTL3 188 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.52■□□□□ 0.4
USH1C-205ENST00000527020 CRTAMO95727 393 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 FMO4P31512 558 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 ACADVLP49748 655 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 TRIM25Q14258 630 aaKnown RBP17.52■□□□□ 0.4
USH1C-205ENST00000527020 TLR1Q15399 786 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 KANK2Q63ZY3 851 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 UGT2A3Q6UWM9 527 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 GLT6D1Q7Z4J2 308 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 TMEM102Q8N9M5 508 aaPredicted RBP17.52■□□□□ 0.4
USH1C-205ENST00000527020 WBP2Q969T9 261 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 KIAA1191Q96A73 305 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 LRGUKQ96M69 825 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 TRAPPC9Q96Q05 1148 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 KCNA7Q96RP8 456 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 CDK5RAP1Q96SZ6 601 aaKnown RBP17.52■□□□□ 0.4
USH1C-205ENST00000527020 TMEM175Q9BSA9 504 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 SLC25A23Q9BV35 468 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 TUBB1Q9H4B7 451 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 SLC24A3Q9HC58 644 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 SPATS2LQ9NUQ6 558 aaKnown RBP17.52■□□□□ 0.4
USH1C-205ENST00000527020 GIMAP2Q9UG22 337 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 CD300AQ9UGN4 299 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 LRFN2Q9ULH4 789 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 FAM50BQ9Y247 325 aa17.52■□□□□ 0.4
USH1C-205ENST00000527020 UBA6A0AVT1 1052 aaPredicted RBP17.52■□□□□ 0.39
USH1C-205ENST00000527020 PRORSD1PA6NEY8 169 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 TBKBP1A7MCY6 615 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 MRASO14807 208 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 NRP2O60462 931 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 RNASEH2AO75792 299 aaKnown RBP17.52■□□□□ 0.39
USH1C-205ENST00000527020 RHOBTB1O94844 696 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 EFEMP2O95967 443 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 PEX19P40855 299 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 RALGDSQ12967 914 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 PDK3Q15120 406 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 TAF1AQ15573 450 aaPredicted RBP17.52■□□□□ 0.39
USH1C-205ENST00000527020 RARS2Q5T160 578 aaKnown RBP17.52■□□□□ 0.39
USH1C-205ENST00000527020 SLC8B1Q6J4K2 584 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 AFTPHQ6ULP2 937 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 SPATA24Q86W54 205 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 RMDN1Q96DB5 314 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 HHIPL1Q96JK4 782 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 ZNF512Q96ME7 567 aaPredicted RBP17.52■□□□□ 0.39
USH1C-205ENST00000527020 ASB2Q96Q27 587 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 DERL2Q9GZP9 239 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 GKN1Q9NS71 199 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 GALPQ9UBC7 116 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 TBC1D30Q9Y2I9 924 aa17.52■□□□□ 0.39
USH1C-205ENST00000527020 ILVBLA1L0T0 632 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 AZIN1O14977 448 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 PIP5K1BO14986 540 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 DNAJA2O60884 412 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 KERAO60938 352 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 CLDN11O75508 207 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 STC2O76061 302 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 C8BP07358 591 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 HMGA1P17096 107 aaKnown RBP17.51■□□□□ 0.39
USH1C-205ENST00000527020 GRB7Q14451 532 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 HACD2Q6Y1H2 254 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 RETREG3Q86VR2 466 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 TWIST2Q8WVJ9 160 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 SLC30A3Q99726 388 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 VN1R3Q9BXE9 311 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 TMEM181Q9P2C4 612 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 PHF24Q9UPV7 400 aa17.51■□□□□ 0.39
USH1C-205ENST00000527020 LCHNA4D1U4 455 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 TXNDC9O14530 226 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 DENRO43583 198 aaKnown RBP17.5■□□□□ 0.39
USH1C-205ENST00000527020 CLASP2O75122 1294 aaKnown RBP17.5■□□□□ 0.39
USH1C-205ENST00000527020 CD160O95971 181 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 INHAP05111 366 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 CORO1AP31146 461 aaKnown RBP17.5■□□□□ 0.39
USH1C-205ENST00000527020 PTPRRQ15256 657 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 HECTD3Q5T447 861 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 IL23RQ5VWK5 629 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 KLHDC10Q6PID8 442 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 LAYNQ6UX15 382 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 RAB44Q7Z6P3 723 aaPredicted RBP17.5■□□□□ 0.39
USH1C-205ENST00000527020 PIANPQ8IYJ0 282 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms