RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 TMCO4Q5TGY1 634 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 ANKS6Q68DC2 871 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 DCUN1D2Q6PH85 259 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 OR4D9Q8NGE8 314 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 ZNF564Q8TBZ8 553 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-201ENST00000526271 KIAA1524Q8TCG1 905 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 SLC37A2Q8TED4 501 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 SCAMP4Q969E2 229 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 RNF31Q96EP0 1072 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 NUDCD1Q96RS6 583 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 GSDMCQ9BYG8 508 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 ABCG8Q9H221 673 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 APMAPQ9HDC9 416 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 PHPT1Q9NRX4 125 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-201ENST00000526271 SEPT3Q9UH03 358 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 PILRAQ9UKJ1 303 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 CNOT6Q9ULM6 557 aaKnown RBP14.22□□□□□ -0.13
CPSF1-201ENST00000526271 PPIL1Q9Y3C6 166 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 OAS3Q9Y6K5 1087 aaKnown RBP14.22□□□□□ -0.13
CPSF1-201ENST00000526271 UNC79Q9P2D8 2635 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 TRBV23OR9-2A0A075B6M9 112 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 LOC101059948A0A1B0GTJ6 334 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 RHPN2P1A8MT19 583 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 K7EM74 188 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 RAD1O60671 282 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 PGLSO95336 258 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 CPP00450 1065 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 ATP1A3P13637 1013 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 TEAD1P28347 426 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 OAS2P29728 719 aaKnown RBP14.21□□□□□ -0.13
CPSF1-201ENST00000526271 GPR3P46089 330 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 HCAR3P49019 387 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 PYCR3Q53H96 274 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-201ENST00000526271 ATP1A1-AS1Q5TC04 95 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 DOK6Q6PKX4 331 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 ARHGAP22Q7Z5H3 698 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 UNC5BQ8IZJ1 945 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 NEK11Q8NG66 645 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 RTP4Q96DX8 246 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 SCRN2Q96FV2 425 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 COX14Q96I36 57 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 CTRCQ99895 268 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 DDA1Q9BW61 102 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 CDH19Q9H159 772 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 ANKMY1Q9P2S6 941 aa14.21□□□□□ -0.13
CPSF1-201ENST00000526271 NOTCH2Q04721 2471 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 A6NCN8 305 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 DDX3XO00571 662 aaKnown RBP eCLIP14.2□□□□□ -0.14
CPSF1-201ENST00000526271 SOCS5O75159 536 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 PRLP01236 227 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 F8A1P23610 371 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 IL4RP24394 825 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 ACTR1BP42025 376 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 ACTR1AP61163 376 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 POLR2LP62875 67 aaKnown RBP14.2□□□□□ -0.14
CPSF1-201ENST00000526271 FOXK1P85037 733 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 PTSQ03393 145 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 DPTQ07507 201 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 ILF3Q12906 894 aaKnown RBP eCLIP14.2□□□□□ -0.14
CPSF1-201ENST00000526271 KCNAB2Q13303 367 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 DPYSL2Q16555 572 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 CLPPQ16740 277 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-201ENST00000526271 TSR1Q2NL82 804 aaKnown RBP14.2□□□□□ -0.14
CPSF1-201ENST00000526271 SMTNL2Q2TAL5 461 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 ANO6Q4KMQ2 910 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 TMEM71Q6P5X7 295 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 BORAQ6PGQ7 559 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 ZNF571Q7Z3V5 609 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-201ENST00000526271 POLNQ7Z5Q5 900 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 LURAP1LQ8IV03 231 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 CACNA2D3Q8IZS8 1091 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 PDCD6IPQ8WUM4 868 aaKnown RBP14.2□□□□□ -0.14
CPSF1-201ENST00000526271 BPIFA3Q9BQP9 254 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 ADNPQ9H2P0 1102 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 PHTF1Q9UMS5 762 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 PCDHB11Q9Y5F2 797 aa14.2□□□□□ -0.14
CPSF1-201ENST00000526271 TNRC6AQ8NDV7 1962 aaKnown RBP14.2□□□□□ -0.14
CPSF1-201ENST00000526271 MED13Q9UHV7 2174 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 EFCAB7A8K855 629 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 B4E171 279 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 EIF3CLB5ME19 914 aaKnown RBP14.19□□□□□ -0.14
CPSF1-201ENST00000526271 DNAJC6O75061 913 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 TSPAN7P41732 249 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 FASLGP48023 281 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 UBXN1Q04323 297 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 TRA2AQ13595 282 aaKnown RBP eCLIP14.19□□□□□ -0.14
CPSF1-201ENST00000526271 FKBP15Q5T1M5 1219 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 LRRC66Q68CR7 880 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 RAET1GQ6H3X3 334 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 ADAMTSL4Q6UY14 1074 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 MARK2Q7KZI7 788 aaKnown RBP14.19□□□□□ -0.14
CPSF1-201ENST00000526271 CPNE8Q86YQ8 564 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 SFRP1Q8N474 314 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 AGBL5Q8NDL9 886 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 LRRN4Q8WUT4 740 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 ZNF599Q96NL3 588 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 CSPG4P5Q96PW8 444 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 OR2M4Q96R27 311 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 EIF3CQ99613 913 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms