RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 EME2A4GXA9 379 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 SRRM3A6NNA2 597 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 H7C0C1 242 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 PDE2AO00408 941 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 SOD1P00441 154 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 SLC4A1P02730 911 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 NFKB1P19838 968 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 CTNNA2P26232 953 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 GNPDA1P46926 289 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 ATP5OP48047 213 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 RPIAP49247 311 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 CDK18Q07002 472 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 DPTQ07507 201 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 KIF5AQ12840 1032 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 PPP2R5EQ16537 467 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 BBS12Q6ZW61 710 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 PID1Q7Z2X4 250 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 LYSMD3Q7Z3D4 306 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 LRRC57Q8N9N7 239 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 FAM46DQ8NEK8 389 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 ALG3Q92685 438 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 TADA1Q96BN2 335 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 CALR3Q96L12 384 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 WDR24Q96S15 920 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 LYSMD1Q96S90 227 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 FAM118BQ9BPY3 351 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 FRMD8Q9BZ67 464 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 SYNDIG1Q9H7V2 258 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 NCKIPSDQ9NZQ3 722 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 KLHL8Q9P2G9 620 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 SUFUQ9UMX1 484 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 PACSIN2Q9UNF0 486 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 SHOC2Q9UQ13 582 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 PCDHB1Q9Y5F3 818 aa12.8□□□□□ -0.36
TRAPPC4-205ENST00000525079 CCDC66A2RUB6 948 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 B4DGG1 531 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 FTCDO95954 541 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 GP1BAP07359 652 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 PYGMP11217 842 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 RBL1P28749 1068 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 SPINT3P49223 89 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 RWDD2BP57060 319 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 COPS2P61201 443 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 NOMO1Q15155 1222 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 CDCP2Q5VXM1 449 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 LVRNQ6Q4G3 990 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 ADAMTSL4Q6UY14 1074 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 MARK2Q7KZI7 788 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 ZNF765Q7L2R6 523 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 PROSER1Q86XN7 944 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 NRSN1Q8IZ57 195 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 ZNF567Q8N184 647 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 DCBLD1Q8N8Z6 715 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 CCHCR1Q8TD31 782 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 HTR3CQ8WXA8 447 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 EID2BQ96D98 161 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 QKIQ96PU8 341 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 OSBPL8Q9BZF1 889 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 FAM83DQ9H4H8 585 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 PKD2L2Q9NZM6 624 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 AMFRQ9UKV5 643 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 DNPEPQ9ULA0 475 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 PLEKHM1Q9Y4G2 1056 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 GPSM3Q9Y4H4 160 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 AK5Q9Y6K8 562 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 SPEGQ15772 3267 aa12.79□□□□□ -0.36
TRAPPC4-205ENST00000525079 GOLGA4Q13439 2230 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 USP24Q9UPU5 2620 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 KMT2BQ9UMN6 2715 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 GOLGA6L6A8MZA4 724 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 HACD1B0YJ81 288 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 APOC4-APOC2K7ER74 178 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 CSO75390 466 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 ASMTLO95671 621 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 APOC2P02655 101 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 ATP1A1P05023 1023 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 AK4P27144 223 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 TEAD1P28347 426 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 WNT3AP56704 352 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 OTUD4Q01804 1114 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 ALS2CLQ60I27 953 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 CCDC70Q6NSX1 233 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 PEX26Q7Z412 305 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 NLRP8Q86W28 1048 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 NRROSQ86YC3 692 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 SDR16C5Q8N3Y7 309 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 SLC25A41Q8N5S1 370 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 ARL10Q8N8L6 244 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 ACTL9Q8TC94 416 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 CCDC74AQ96AQ1 378 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 HIC2Q96JB3 615 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 CCDC3Q9BQI4 270 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 DPEP2Q9H4A9 486 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 ZFYVE1Q9HBF4 777 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 ARFGAP3Q9NP61 516 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 SPATS2LQ9NUQ6 558 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 FAM153AQ9UHL3 310 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 RABGEF1Q9UJ41 708 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 SLC17A4Q9Y2C5 497 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 RAXQ9Y2V3 346 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms