RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	PLPP4	Q5VZY2	271 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	ICE2	Q659A1	982 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	NCEH1	Q6PIU2	408 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	EPGN	Q6UW88	154 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	PIM3	Q86V86	326 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	SCUBE1	Q8IWY4	988 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	SPATA6L	Q8N4H0	392 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	OR52K2	Q8NGK3	314 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	CFAP61	Q8NHU2	1237 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	AGAP11	Q8TF27	550 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	STON2	Q8WXE9	905 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	ACD	Q96AP0	544 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	CDKN2AIPNL	Q96HQ2	116 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	PPP1R36	Q96LQ0	422 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	CYP2S1	Q96SQ9	504 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	SHCBP1L	Q9BZQ2	653 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	TM6SF2	Q9BZW4	377 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	PFDN4	Q9NQP4	134 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	THEG	Q9P2T0	379 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	ANGPTL2	Q9UKU9	493 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	RNF112	Q9ULX5	631 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	ARHGAP26	Q9UNA1	814 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	FCF1	Q9Y324	198 aa	Known RBP	10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	PCDHGC4	Q9Y5F7	938 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	SPO11	Q9Y5K1	396 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006	ACTL7A	Q9Y615	435 aa		10.75	□□□□□ -0.69
SPIDR-222	ENST00000524006		A0A1W2PRU2	124 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	ANKRD66	B4E2M5	251 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	MATN2	O00339	956 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	CCL16	O15467	120 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	GSC2	O15499	205 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	DCX	O43602	365 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	MAGEC1	O60732	1142 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	SNX2	O60749	519 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	SOCS5	O75159	536 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	XYLB	O75191	536 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	SKAP2	O75563	359 aa	Predicted RBP	10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	OLFM2	O95897	454 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	CR2	P20023	1033 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	ITGAL	P20701	1170 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	NFKBIA	P25963	317 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	FMO4	P31512	558 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	CSRP3	P50461	194 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	CDKN2D	P55273	166 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	STX1B	P61266	288 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	SNRPD1	P62314	119 aa	Known RBP	10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	SATB1	Q01826	763 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	CACNG1	Q06432	222 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	DLG1	Q12959	904 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	ZNF789	Q5FWF6	425 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	VWA5B1	Q5TIE3	1220 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	C1orf146	Q5VVC0	180 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	C16orf89	Q6UX73	402 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006		Q6ZNB5	142 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	TPGS1	Q6ZTW0	290 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	FRA10AC1	Q70Z53	315 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	TREML1	Q86YW5	311 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	NKAP	Q8N5F7	415 aa	Known RBP	10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	KLHL23	Q8NBE8	558 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	MICAL1	Q8TDZ2	1067 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	WBP2	Q969T9	261 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	ZFR	Q96KR1	1074 aa	Known RBP	10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	SERPINI1	Q99574	410 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	THTPA	Q9BU02	230 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	CADM1	Q9BY67	442 aa	Known RBP	10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	NUF2	Q9BZD4	464 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	SLC28A3	Q9HAS3	691 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	RNPEPL1	Q9HAU8	725 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	IL21	Q9HBE4	155 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	FKBPL	Q9UIM3	349 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	PCDHB9	Q9Y5E1	797 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	DOCK6	Q96HP0	2047 aa		10.74	□□□□□ -0.69
SPIDR-222	ENST00000524006	PABPN1L	A6NDY0	278 aa	Known RBP	10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006		H0Y3Z8	333 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	LEFTY2	O00292	366 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	TLL1	O43897	1013 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	GPC4	O75487	556 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	SUPT7L	O94864	414 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	PGLS	O95336	258 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	THRA	P10827	490 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	COX4I1	P13073	169 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	PKM	P14618	531 aa	Known RBP	10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	ZNF37A	P17032	561 aa	Predicted RBP	10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	COL9A1	P20849	921 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	ADSL	P30566	484 aa	Predicted RBP	10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	RECQL	P46063	649 aa	Predicted RBP	10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	PLK1	P53350	603 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	PGGT1B	P53609	377 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	KLF10	Q13118	480 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	PTPRCAP	Q14761	206 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	PTPRN	Q16849	979 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	SLC9B1	Q4ZJI4	515 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	MPP7	Q5T2T1	576 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	LYPLAL1	Q5VWZ2	237 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	PTRHD1	Q6GMV3	140 aa	Known RBP	10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	CERS6	Q6ZMG9	384 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	FRMD7	Q6ZUT3	714 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	HTR3D	Q70Z44	454 aa		10.73	□□□□□ -0.69
SPIDR-222	ENST00000524006	EFL1	Q7Z2Z2	1120 aa	Known RBP	10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms