RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 A0A0D9SEW6 157 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 ACSL4O60488 711 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 KERAO60938 352 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 MT-CO1P00395 513 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 PIRTP0C851 137 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 KCNQ1P51787 676 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 CDKL1Q00532 357 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 GNA12Q03113 381 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 RALGDSQ12967 914 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 PFKFB4Q16877 469 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 EML3Q32P44 896 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 SETMARQ53H47 684 aaPredicted RBP11.28□□□□□ -0.6
TNPO1-213ENST00000523768 RNF19BQ6ZMZ0 732 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 STAG3L4Q8TBR4 150 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 EXT2Q93063 718 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 SLCO4A1Q96BD0 722 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 TCF12Q99081 682 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 SEPT5Q99719 369 aaPredicted RBP11.28□□□□□ -0.6
TNPO1-213ENST00000523768 GPATCH1Q9BRR8 931 aaKnown RBP11.28□□□□□ -0.6
TNPO1-213ENST00000523768 TTLL2Q9BWV7 592 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 SLC2A11Q9BYW1 496 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 ELAC1Q9H777 363 aaKnown RBP11.28□□□□□ -0.6
TNPO1-213ENST00000523768 MED16Q9Y2X0 877 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 NDUFAF1Q9Y375 327 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 ARIH1Q9Y4X5 557 aaPredicted RBP11.28□□□□□ -0.6
TNPO1-213ENST00000523768 A0A0J9YYE9 177 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 LCHNA4D1U4 455 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 PPP6CO00743 305 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 PIP5K1BO14986 540 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 TNFAIP8O95379 198 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 MATN4O95460 622 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 RPL5P46777 297 aaKnown RBP11.28□□□□□ -0.6
TNPO1-213ENST00000523768 ATP6V0D1P61421 351 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 NAA20P61599 178 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 USP41Q3LFD5 358 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 FAM219BQ5XKK7 198 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 AFTPHQ6ULP2 937 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 RSPO2Q6UXX9 243 aaPredicted RBP11.28□□□□□ -0.6
TNPO1-213ENST00000523768 RETREG3Q86VR2 466 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 CFAP52Q8N1V2 620 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 GALNT4Q8N4A0 578 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 SNX31Q8N9S9 440 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 B3GALT6Q96L58 329 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 CDK5RAP1Q96SZ6 601 aaKnown RBP11.28□□□□□ -0.6
TNPO1-213ENST00000523768 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 HOPXQ9BPY8 73 aaPredicted RBP11.28□□□□□ -0.6
TNPO1-213ENST00000523768 MARCH5Q9NX47 278 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 TAS2R13Q9NYV9 303 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 COMMD3-BMI1R4GMX3 469 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 THSD7BQ9C0I4 1608 aa11.28□□□□□ -0.6
TNPO1-213ENST00000523768 LRRC14BA6NHZ5 514 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 CLASP2O75122 1294 aaKnown RBP11.27□□□□□ -0.6
TNPO1-213ENST00000523768 RHOBTB1O94844 696 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 TFAP2AP05549 437 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 HSPA8P11142 646 aaKnown RBP11.27□□□□□ -0.6
TNPO1-213ENST00000523768 GFAPP14136 432 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 CR2P20023 1033 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 SLC6A4P31645 630 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 SLC7A2P52569 658 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 CDH4P55283 916 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 FOXA1P55317 472 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 TAF1AQ15573 450 aaPredicted RBP11.27□□□□□ -0.6
TNPO1-213ENST00000523768 KIF19Q2TAC6 998 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 PAQR3Q6TCH7 311 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 HERC6Q8IVU3 1022 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 MIER2Q8N344 545 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 OR7D4Q8NG98 312 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 C2orf15Q8WU43 125 aaKnown RBP11.27□□□□□ -0.6
TNPO1-213ENST00000523768 NAT14Q8WUY8 206 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 PBXIP1Q96AQ6 731 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 EME1Q96AY2 570 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 ZNF597Q96LX8 424 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 CNBD2Q96M20 576 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 NSMCE3Q96MG7 304 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 PRICKLE1Q96MT3 831 aaPredicted RBP11.27□□□□□ -0.6
TNPO1-213ENST00000523768 NSUN5Q96P11 429 aaKnown RBP11.27□□□□□ -0.6
TNPO1-213ENST00000523768 TUBB1Q9H4B7 451 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 MAP10Q9P2G4 905 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 ABCD2Q9UBJ2 740 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 SPO11Q9Y5K1 396 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 ANKRD36A6QL64 1941 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 CASP8AP2Q9UKL3 1982 aa11.27□□□□□ -0.6
TNPO1-213ENST00000523768 H3BNC9 293 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 KDELR3O43731 214 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 VPS4BO75351 444 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 ALDH2P05091 517 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 PRSS56P0CW18 603 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 ELNP15502 786 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 LBPP18428 481 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 MYBPC1Q00872 1141 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 CLCQ05315 142 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 LCP2Q13094 533 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 DUSP4Q13115 394 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 C6orf52Q5T4I8 152 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 PRMT9Q6P2P2 845 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 FUT10Q6P4F1 479 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 LAYNQ6UX15 382 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 SATL1Q86VE3 508 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 FBXO39Q8N4B4 442 aa11.27□□□□□ -0.61
TNPO1-213ENST00000523768 MINDY1Q8N5J2 469 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms