RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 C15orf39Q6ZRI6 1047 aa2.54□□□□□ -2
PCM1-208ENST00000518877 CTAGE4Q8IX94 777 aa2.54□□□□□ -2
PCM1-208ENST00000518877 DSELQ8IZU8 1212 aa2.54□□□□□ -2
PCM1-208ENST00000518877 PLD5Q8N7P1 536 aa2.54□□□□□ -2
PCM1-208ENST00000518877 LSM14AQ8ND56 463 aaKnown RBP2.54□□□□□ -2
PCM1-208ENST00000518877 OR2AK2Q8NG84 335 aa2.54□□□□□ -2
PCM1-208ENST00000518877 FBXL8Q96CD0 374 aa2.54□□□□□ -2
PCM1-208ENST00000518877 ELP4Q96EB1 424 aa2.54□□□□□ -2
PCM1-208ENST00000518877 ZNF414Q96IQ9 312 aa2.54□□□□□ -2
PCM1-208ENST00000518877 LINC00479Q96M42 142 aa2.54□□□□□ -2
PCM1-208ENST00000518877 PCYT2Q99447 389 aa2.54□□□□□ -2
PCM1-208ENST00000518877 SYT17Q9BSW7 474 aa2.54□□□□□ -2
PCM1-208ENST00000518877 POLR3CQ9BUI4 534 aaPredicted RBP2.54□□□□□ -2
PCM1-208ENST00000518877 CDK19Q9BWU1 502 aa2.54□□□□□ -2
PCM1-208ENST00000518877 NUF2Q9BZD4 464 aa2.54□□□□□ -2
PCM1-208ENST00000518877 TAOK3Q9H2K8 898 aa2.54□□□□□ -2
PCM1-208ENST00000518877 PPCSQ9HAB8 311 aa2.54□□□□□ -2
PCM1-208ENST00000518877 MMP25Q9NPA2 562 aa2.54□□□□□ -2
PCM1-208ENST00000518877 RASSF1Q9NS23 344 aa2.54□□□□□ -2
PCM1-208ENST00000518877 BABAM1Q9NWV8 329 aa2.54□□□□□ -2
PCM1-208ENST00000518877 MAP3K20Q9NYL2 800 aaKnown RBP2.54□□□□□ -2
PCM1-208ENST00000518877 CTNNAL1Q9UBT7 734 aa2.54□□□□□ -2
PCM1-208ENST00000518877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.54□□□□□ -2
PCM1-208ENST00000518877 OR2W1Q9Y3N9 320 aa2.54□□□□□ -2
PCM1-208ENST00000518877 COMMD10Q9Y6G5 202 aa2.54□□□□□ -2
PCM1-208ENST00000518877 SMIM1B2RUZ4 78 aa2.53□□□□□ -2
PCM1-208ENST00000518877 MAOAP21397 527 aa2.53□□□□□ -2
PCM1-208ENST00000518877 SHMT1P34896 483 aa2.53□□□□□ -2
PCM1-208ENST00000518877 MMP14P50281 582 aa2.53□□□□□ -2
PCM1-208ENST00000518877 RAD23BP54727 409 aa2.53□□□□□ -2
PCM1-208ENST00000518877 PDE1BQ01064 536 aa2.53□□□□□ -2
PCM1-208ENST00000518877 TBL3Q12788 808 aaKnown RBP2.53□□□□□ -2
PCM1-208ENST00000518877 PDCD2Q16342 344 aaPredicted RBP2.53□□□□□ -2
PCM1-208ENST00000518877 SIRPB2Q5JXA9 342 aa2.53□□□□□ -2
PCM1-208ENST00000518877 SERTAD4-AS1Q5TG53 156 aa2.53□□□□□ -2
PCM1-208ENST00000518877 LINGO2Q7L985 606 aa2.53□□□□□ -2
PCM1-208ENST00000518877 BEST2Q8NFU1 509 aa2.53□□□□□ -2
PCM1-208ENST00000518877 WDR20Q8TBZ3 569 aa2.53□□□□□ -2
PCM1-208ENST00000518877 RUFY2Q8WXA3 655 aa2.53□□□□□ -2
PCM1-208ENST00000518877 TMEM190Q8WZ59 177 aa2.53□□□□□ -2
PCM1-208ENST00000518877 CCT6BQ92526 530 aa2.53□□□□□ -2
PCM1-208ENST00000518877 TM9SF4Q92544 642 aa2.53□□□□□ -2
PCM1-208ENST00000518877 ZNF653Q96CK0 615 aa2.53□□□□□ -2
PCM1-208ENST00000518877 STAMBPL1Q96FJ0 436 aa2.53□□□□□ -2
PCM1-208ENST00000518877 ST6GAL2Q96JF0 529 aa2.53□□□□□ -2
PCM1-208ENST00000518877 SIN3AQ96ST3 1273 aa2.53□□□□□ -2
PCM1-208ENST00000518877 CD180Q99467 661 aa2.53□□□□□ -2
PCM1-208ENST00000518877 CMKLR1Q99788 373 aa2.53□□□□□ -2
PCM1-208ENST00000518877 REEP2Q9BRK0 252 aa2.53□□□□□ -2
PCM1-208ENST00000518877 HEMGNQ9BXL5 484 aa2.53□□□□□ -2
PCM1-208ENST00000518877 MAGEE1Q9HCI5 957 aa2.53□□□□□ -2
PCM1-208ENST00000518877 SNTG1Q9NSN8 517 aa2.53□□□□□ -2
PCM1-208ENST00000518877 PEMTQ9UBM1 199 aa2.53□□□□□ -2
PCM1-208ENST00000518877 HSF4Q9ULV5 492 aa2.53□□□□□ -2
PCM1-208ENST00000518877 DLGAP4Q9Y2H0 992 aa2.53□□□□□ -2
PCM1-208ENST00000518877 LSM4Q9Y4Z0 139 aaKnown RBP2.53□□□□□ -2
PCM1-208ENST00000518877 ARHGEF9O43307 516 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 WDR1O75083 606 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 SORBS2O94875 1100 aaKnown RBP2.52□□□□□ -2.01
PCM1-208ENST00000518877 CAVIN2O95810 425 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 HEXAP06865 529 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 RRM1P23921 792 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 KRT9P35527 623 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 METAP2P50579 478 aaKnown RBP eCLIP2.52□□□□□ -2.01
PCM1-208ENST00000518877 ARL4CP56559 192 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 EEF1A1P68104 462 aaKnown RBP2.52□□□□□ -2.01
PCM1-208ENST00000518877 SLC12A1Q13621 1099 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 ADCK5Q3MIX3 580 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 FBXO47Q5MNV8 452 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 EEF1A1P5Q5VTE0 462 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 FBXO46Q6PJ61 603 aaPredicted RBP2.52□□□□□ -2.01
PCM1-208ENST00000518877 ATF7IPQ6VMQ6 1270 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 GPAT4Q86UL3 456 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 TMTC1Q8IUR5 882 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 SLC35F3Q8IY50 421 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 SPATA6LQ8N4H0 392 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 STPG4Q8N801 248 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 HERVK_113Q902F9 699 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 EYA3Q99504 573 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 MTERF1Q99551 399 aaKnown RBP2.52□□□□□ -2.01
PCM1-208ENST00000518877 OPRPNQ99935 248 aaPredicted RBP2.52□□□□□ -2.01
PCM1-208ENST00000518877 SLC52A3Q9NQ40 469 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 CCDC177Q9NQR7 707 aaPredicted RBP2.52□□□□□ -2.01
PCM1-208ENST00000518877 GGA3Q9NZ52 723 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 KIAA1456Q9P272 454 aa2.52□□□□□ -2.01
PCM1-208ENST00000518877 ZNF624Q9P2J8 865 aaPredicted RBP2.52□□□□□ -2.01
PCM1-208ENST00000518877 FBXO9Q9UK97 447 aaPredicted RBP2.52□□□□□ -2.01
PCM1-208ENST00000518877 KIAA1210Q9ULL0 1709 aa2.51□□□□□ -2.01
PCM1-208ENST00000518877 TMEM202A6NGA9 273 aa2.51□□□□□ -2.01
PCM1-208ENST00000518877 EIF3FO00303 357 aaPredicted RBP2.51□□□□□ -2.01
PCM1-208ENST00000518877 PSMD14O00487 310 aa2.51□□□□□ -2.01
PCM1-208ENST00000518877 BCAT2O15382 392 aaPredicted RBP2.51□□□□□ -2.01
PCM1-208ENST00000518877 IRAK2O43187 625 aa2.51□□□□□ -2.01
PCM1-208ENST00000518877 IGHV4-39P01824 125 aa2.51□□□□□ -2.01
PCM1-208ENST00000518877 ERVK-10P10266 1014 aa2.51□□□□□ -2.01
PCM1-208ENST00000518877 DDX5P17844 614 aaKnown RBP2.51□□□□□ -2.01
PCM1-208ENST00000518877 BDKRB2P30411 391 aa2.51□□□□□ -2.01
PCM1-208ENST00000518877 RPL24P83731 157 aaKnown RBP2.51□□□□□ -2.01
PCM1-208ENST00000518877 GAGE5Q13069 117 aa2.51□□□□□ -2.01
PCM1-208ENST00000518877 GAGE6Q13070 117 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms