RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 CHRNA4P43681 627 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 TNNT3P45378 269 aaPredicted RBP11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 GPR1P46091 355 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 GDF10P55107 478 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 CDK3Q00526 305 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 MSLNQ13421 630 aaPredicted RBP11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 PRRT3Q5FWE3 981 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 ZNF569Q5MCW4 686 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 DRICH1Q6PGQ1 229 aaPredicted RBP11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 ADAMTSL4Q6UY14 1074 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 NYAP1Q6ZVC0 841 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 HEATR4Q86WZ0 1026 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 HID1Q8IV36 788 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 SDR16C5Q8N3Y7 309 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 SLC25A41Q8N5S1 370 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 GPR26Q8NDV2 337 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 ZNF548Q8NEK5 533 aaPredicted RBP11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 IPMKQ8NFU5 416 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 LMX1AQ8TE12 382 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 MAIP1Q8WWC4 291 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 C1orf54Q8WWF1 131 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 ATG4AQ8WYN0 398 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 PPP1R2P1Q96PQ5 205 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 AGAP2Q99490 1192 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 DUSP23Q9BVJ7 150 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 GPR63Q9BZJ6 419 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 CLPBQ9H078 707 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 ARNT2Q9HBZ2 717 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 PHPT1Q9NRX4 125 aaPredicted RBP11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 NLGN3Q9NZ94 848 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 PKD2L2Q9NZM6 624 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 KLQ9UEF7 1012 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 APOBEC3BQ9UH17 382 aaKnown RBP11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 CNOT6Q9ULM6 557 aaKnown RBP11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 ZNF148Q9UQR1 794 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 APOBEC2Q9Y235 224 aaKnown RBP11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 ZKSCAN5Q9Y2L8 839 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 SPO11Q9Y5K1 396 aa11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 TDRD6O60522 2096 aaKnown RBP11.11□□□□□ -0.63
SCARNA20-201ENST00000516768 LMO7DNF2Z398 122 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 YY2O15391 372 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 TRIM16O95361 564 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 METTL18O95568 372 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 CTSEP14091 401 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 CKMT2P17540 419 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 PMLP29590 882 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 C1orf61Q13536 156 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 SNX1Q13596 522 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 PROX2Q3B8N5 592 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 HS1BP3Q53T59 392 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 HENMT1Q5T8I9 393 aaKnown RBP11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 KCTD16Q68DU8 428 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 KCTD11Q693B1 232 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 RAET1GQ6H3X3 334 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 DENND5AQ6IQ26 1287 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 LVRNQ6Q4G3 990 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 ARHGEF18Q6ZSZ5 1173 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 RD3Q7Z3Z2 195 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 RBFAQ8N0V3 343 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 RASGEF1CQ8N431 466 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 FAM181AQ8N9Y4 354 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 OR1E3Q8WZA6 343 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 SCARF2Q96GP6 870 aaPredicted RBP11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 COX14Q96I36 57 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 HIC2Q96JB3 615 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 PBKQ96KB5 322 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 CNDP2Q96KP4 475 aaKnown RBP11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 FSD1LQ9BXM9 530 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 FGF22Q9HCT0 170 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 MRPL40Q9NQ50 206 aaKnown RBP11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 RAD18Q9NS91 495 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 HOMER3Q9NSC5 361 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 HACD3Q9P035 362 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 FTSJ1Q9UET6 329 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 WASF3Q9UPY6 502 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 SLC17A4Q9Y2C5 497 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 ZNF711Q9Y462 761 aa11.1□□□□□ -0.63
SCARNA20-201ENST00000516768 PRSS38A1L453 326 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 GOLGA6CA6NDK9 693 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 GOLGA6BA6NDN3 693 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 FFAR2O15552 330 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 PSMD3O43242 534 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 KIF5CO60282 957 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 FGF1P05230 155 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 FTH1P19P0C7X4 201 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 GOLGA6DP0CG33 693 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 ALPPL2P10696 532 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 BPIP17213 487 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 MSNP26038 577 aaKnown RBP11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 DCDC1P59894 354 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 ELOCQ15369 112 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 LONRF2Q1L5Z9 754 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 P3H1Q32P28 736 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 SLC35F6Q8N357 371 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 FSTL5Q8N475 847 aaPredicted RBP11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 TTC30BQ8N4P2 665 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 PNPLA1Q8N8W4 532 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 DTX3LQ8TDB6 740 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 BRSK1Q8TDC3 778 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 ADAMTS14Q8WXS8 1223 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms