RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	KIAA0754	O94854	1291 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	EML2	O95834	649 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	GNA14	O95837	355 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	IVL	P07476	585 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	PRF1	P14222	555 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	EPHB2	P29323	1055 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	CDH5	P33151	784 aa	Predicted RBP	10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	STX17	P56962	302 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	YBEY	P58557	167 aa	Predicted RBP	10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	HHEX	Q03014	270 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	BCL2L1	Q07817	233 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	DNASE1L3	Q13609	305 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	NR6A1	Q15406	480 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	CNGA3	Q16281	694 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	PARP15	Q460N3	678 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	RAET1G	Q6H3X3	334 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	MARK2	Q7KZI7	788 aa	Known RBP	10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	LYSMD3	Q7Z3D4	306 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	SRL	Q86TD4	932 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	RASGRP3	Q8IV61	690 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	PYROXD2	Q8N2H3	581 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	SFRP1	Q8N474	314 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	FNIP1	Q8TF40	1166 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	MARVELD3	Q96A59	401 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	ECHDC3	Q96DC8	303 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	ELMO2	Q96JJ3	720 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	C5orf34	Q96MH7	638 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	MFRP	Q9BY79	579 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	ACTL8	Q9H568	366 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	PDF	Q9HBH1	243 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	SLAMF7	Q9NQ25	335 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	B4GALT6	Q9UBX8	382 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	LNPEP	Q9UIQ6	1025 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	SLC17A4	Q9Y2C5	497 aa		10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	PCDHGA9	Q9Y5G4	932 aa	Known RBP	10.44	□□□□□ -0.74
CLDND1-231	ENST00000515620	SETD2	Q9BYW2	2564 aa	Predicted RBP	10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	ARHGAP10	A1A4S6	786 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	BICDL2	A1A5D9	508 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620		J3KR12	359 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	FOXN3	O00409	490 aa	Predicted RBP	10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	LRCH4	O75427	683 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	NDUFA10	O95299	355 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	SDC4	P31431	198 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	ETV3	P41162	512 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	GARS	P41250	739 aa	Known RBP	10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	CCL11	P51671	97 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	NAA30	Q147X3	362 aa	Predicted RBP	10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	CCDC14	Q49A88	953 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	TAF3	Q5VWG9	929 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	JMJD6	Q6NYC1	403 aa	Predicted RBP	10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	ARC	Q7LC44	396 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	TRIM74	Q86UV6	250 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	TP53INP2	Q8IXH6	220 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620		Q8NA96	180 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	TTC13	Q8NBP0	860 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	TSEN2	Q8NCE0	465 aa	Known RBP	10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	MSANTD4	Q8NCY6	345 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	GPT2	Q8TD30	523 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	CT55	Q8WUE5	264 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	RXFP2	Q8WXD0	754 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	GDPD2	Q9HCC8	539 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	ACSS2	Q9NR19	701 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	TMEM98	Q9Y2Y6	226 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	PCDHGA6	Q9Y5G7	932 aa		10.43	□□□□□ -0.74
CLDND1-231	ENST00000515620	PRRC2C	Q9Y520	2896 aa	Known RBP	10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	MN1	Q10571	1320 aa	Predicted RBP	10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	ARGFX	A6NJG6	315 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	KRT86	O43790	486 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	PRAMEF11	O60813	436 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	ANKRD34C	P0C6C1	535 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	PPP1R2	P41236	205 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	CSNK1D	P48730	415 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	EPHA4	P54764	986 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	GFER	P55789	205 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	HDAC4	P56524	1084 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	RPS18	P62269	152 aa	Known RBP	10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	POLR2L	P62875	67 aa	Known RBP	10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	SH3BP2	P78314	561 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	CHRNA6	Q15825	494 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	EXOC3L4	Q17RC7	722 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	NAA35	Q5VZE5	725 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	SLC6A19	Q695T7	634 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	GBP6	Q6ZN66	633 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	HSD11B1L	Q7Z5J1	315 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	ZC3H18	Q86VM9	953 aa	Known RBP	10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	GALNT13	Q8IUC8	556 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	PLXDC1	Q8IUK5	500 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	SLC34A3	Q8N130	599 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	UMODL1-AS1	Q8N2C9	162 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	FAM172A	Q8WUF8	416 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	CPA5	Q8WXQ8	436 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	C19orf60	Q96EN9	201 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	DTD2	Q96FN9	168 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	SCARF2	Q96GP6	870 aa	Predicted RBP	10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	OR6C1	Q96RD1	312 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	RUFY1	Q96T51	708 aa		10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	CINP	Q9BW66	212 aa	Predicted RBP	10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	STN1	Q9H668	368 aa	Known RBP	10.42	□□□□□ -0.74
CLDND1-231	ENST00000515620	MLXIPL	Q9NP71	852 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms