RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 MAPK15Q8TD08 544 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 EID2BQ96D98 161 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 RBM41Q96IZ5 413 aaKnown RBP11.46□□□□□ -0.57
VCAN-212ENST00000515397 TEKT5Q96M29 485 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 TRIB3Q96RU7 358 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 WDR24Q96S15 920 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 BOCQ9BWV1 1114 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 TEX101Q9BY14 249 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 SLC25A51Q9H1U9 297 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 CCDC86Q9H6F5 360 aaKnown RBP11.46□□□□□ -0.57
VCAN-212ENST00000515397 SYNDIG1Q9H7V2 258 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 PHPT1Q9NRX4 125 aaPredicted RBP11.46□□□□□ -0.57
VCAN-212ENST00000515397 RABGEF1Q9UJ41 708 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 PADI4Q9UM07 663 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 SUFUQ9UMX1 484 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.46□□□□□ -0.57
VCAN-212ENST00000515397 PCDHB1Q9Y5F3 818 aa11.46□□□□□ -0.57
VCAN-212ENST00000515397 PKD1L2Q7Z442 2459 aa11.46□□□□□ -0.58
VCAN-212ENST00000515397 FREM2Q5SZK8 3169 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 ZFYVE26Q68DK2 2539 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 COL5A1P20908 1838 aaPredicted RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 TRBV23OR9-2A0A075B6M9 112 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 EME2A4GXA9 379 aaPredicted RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 PSMD11O00231 422 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 TPP1O14773 563 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 AURKAO14965 403 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 ASMTLO95671 621 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 ATP1A1P05023 1023 aaKnown RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 HOXC4P09017 264 aaPredicted RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 MYCLP1P12525 358 aaPredicted RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 CA4P22748 312 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 NFKBIAP25963 317 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 CTNNA1P35221 906 aaKnown RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 CHRNA4P43681 627 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 DUSP3P51452 185 aaPredicted RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 OTUD4Q01804 1114 aaKnown RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 CDK18Q07002 472 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 ILKQ13418 452 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 C6orf132Q5T0Z8 1188 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 ALS2CLQ60I27 953 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 GKN2Q86XP6 184 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 NRROSQ86YC3 692 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 FSTL5Q8N475 847 aaPredicted RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 Q8N9G6 341 aaPredicted RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 ACTL9Q8TC94 416 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 OSBPL8Q9BZF1 889 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 DPEP2Q9H4A9 486 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 BPIFA1Q9NP55 256 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 SPATS2LQ9NUQ6 558 aaKnown RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 HAUS2Q9NVX0 235 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 KLHL8Q9P2G9 620 aaPredicted RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 IMPACTQ9P2X3 320 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 CNOT6Q9ULM6 557 aaKnown RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 CLCA2Q9UQC9 943 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 RAXQ9Y2V3 346 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 GPSM3Q9Y4H4 160 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 SPO11Q9Y5K1 396 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 PCYT1BQ9Y5K3 369 aaPredicted RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 ST14Q9Y5Y6 855 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 OAS3Q9Y6K5 1087 aaKnown RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 AK5Q9Y6K8 562 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 DGKBQ9Y6T7 804 aa11.45□□□□□ -0.58
VCAN-212ENST00000515397 DSPP15924 2871 aaKnown RBP11.45□□□□□ -0.58
VCAN-212ENST00000515397 BTNL10A8MVZ5 291 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 B4DGG1 531 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 BUD23O43709 281 aaKnown RBP11.44□□□□□ -0.58
VCAN-212ENST00000515397 KELP23276 732 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 CTNNA2P26232 953 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 SPINT3P49223 89 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 WNT3AP56704 352 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 RWDD2BP57060 319 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 E2F1Q01094 437 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 DPTQ07507 201 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 KIF5AQ12840 1032 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 OLIG2Q13516 323 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 SLC30A9Q6PML9 568 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 C19orf48Q6RUI8 117 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 BZW1Q7L1Q6 419 aaKnown RBP11.44□□□□□ -0.58
VCAN-212ENST00000515397 PEX26Q7Z412 305 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 PDCD7Q8N8D1 485 aaKnown RBP11.44□□□□□ -0.58
VCAN-212ENST00000515397 ATL2Q8NHH9 583 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 PATE1Q8WXA2 126 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 HTR3CQ8WXA8 447 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 SCG3Q8WXD2 468 aaKnown RBP11.44□□□□□ -0.58
VCAN-212ENST00000515397 TADA1Q96BN2 335 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 OXNAD1Q96HP4 312 aaPredicted RBP11.44□□□□□ -0.58
VCAN-212ENST00000515397 QKIQ96PU8 341 aaKnown RBP eCLIP11.44□□□□□ -0.58
VCAN-212ENST00000515397 CCDC3Q9BQI4 270 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 ADGRE3Q9BY15 652 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 FRMD8Q9BZ67 464 aaPredicted RBP11.44□□□□□ -0.58
VCAN-212ENST00000515397 FAM83DQ9H4H8 585 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 AMFRQ9UKV5 643 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 GUCA1BQ9UMX6 200 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 CHD6Q8TD26 2715 aa11.44□□□□□ -0.58
VCAN-212ENST00000515397 TCRBV7S2A1N4TA0A589 114 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 PMS2P1A4D2B8 440 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 FADS2P1A8MWK0 482 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 APOC4-APOC2K7ER74 178 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 PDE2AO00408 941 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms