RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 POLD2P49005 469 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 MPP3Q13368 585 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 OLIG2Q13516 323 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 SPARCL1Q14515 664 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 AGERQ15109 404 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 LONRF2Q1L5Z9 754 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 SIRPB2Q5JXA9 342 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 KDELC1Q6UW63 502 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 ZNF662Q6ZS27 426 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 MARK2Q7KZI7 788 aaKnown RBP11.49□□□□□ -0.57
SUB1-213ENST00000515355 TECPR1Q7Z6L1 1165 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 OR56A4Q8NGH8 313 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 MRGPRX2Q96LB1 330 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 SPATA13Q96N96 652 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 TRIB3Q96RU7 358 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 FAM83DQ9H4H8 585 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 CARS2Q9HA77 564 aaKnown RBP11.49□□□□□ -0.57
SUB1-213ENST00000515355 USP29Q9HBJ7 922 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 ARFGAP3Q9NP61 516 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 GPR27Q9NS67 375 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 KCTD5Q9NXV2 234 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 SIRPGQ9P1W8 387 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 GULP1Q9UBP9 304 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 PNMA8BQ9ULN7 279 aaPredicted RBP11.49□□□□□ -0.57
SUB1-213ENST00000515355 ZNF711Q9Y462 761 aa11.49□□□□□ -0.57
SUB1-213ENST00000515355 AURKAO14965 403 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 USP12O75317 370 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 GCATO75600 419 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 FGGP02679 453 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 CELA2BP08218 269 aaPredicted RBP11.48□□□□□ -0.57
SUB1-213ENST00000515355 MYCLP1P12525 358 aaPredicted RBP11.48□□□□□ -0.57
SUB1-213ENST00000515355 ACTN2P35609 894 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 GNPDA1P46926 289 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 SPINT3P49223 89 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 LMAN1P49257 510 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 HK3P52790 923 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 GDF10P55107 478 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 CDK3Q00526 305 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 FOXK2Q01167 660 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 KLF1Q13351 362 aaPredicted RBP11.48□□□□□ -0.57
SUB1-213ENST00000515355 SLC1A5Q15758 541 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 KCTD16Q68DU8 428 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 GSTA5Q7RTV2 222 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 TAF8Q7Z7C8 310 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 SPNS2Q8IVW8 549 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 NRSN1Q8IZ57 195 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 OR4C6Q8NH72 309 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 SCG3Q8WXD2 468 aaKnown RBP11.48□□□□□ -0.57
SUB1-213ENST00000515355 OR1E3Q8WZA6 343 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 TADA1Q96BN2 335 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 LRRC45Q96CN5 670 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 PDXPQ96GD0 296 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 LRRC61Q9BV99 259 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 SPATA16Q9BXB7 569 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 TLR10Q9BXR5 811 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 CARD9Q9H257 536 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 MAGEE1Q9HCI5 957 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 FGF22Q9HCT0 170 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 AAR2Q9Y312 384 aaKnown RBP11.48□□□□□ -0.57
SUB1-213ENST00000515355 GPSM3Q9Y4H4 160 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 SPO11Q9Y5K1 396 aa11.48□□□□□ -0.57
SUB1-213ENST00000515355 LOC285095A0A1B0GVY8 99 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 CPED1A4D0V7 1026 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 C5orf60A6NFR6 353 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 YY2O15391 372 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 LIASO43766 372 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 KIF5CO60282 957 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 ATP1A1P05023 1023 aaKnown RBP11.47□□□□□ -0.57
SUB1-213ENST00000515355 CKMT2P17540 419 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 TRIM23P36406 574 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 TERF1P54274 439 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 KIAA1024LP59773 190 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 ELOCQ15369 112 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 DHRS13Q6UX07 377 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 KANSL1Q7Z3B3 1105 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 GLT6D1Q7Z4J2 308 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 PRUNE1Q86TP1 453 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 GKN2Q86XP6 184 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 REXO1L1PQ8IX06 675 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 CBARPQ8N350 705 aaPredicted RBP11.47□□□□□ -0.57
SUB1-213ENST00000515355 SLC35F6Q8N357 371 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 CCDC89Q8N998 374 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 GDAP1Q8TB36 358 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 BAHD1Q8TBE0 780 aaPredicted RBP11.47□□□□□ -0.57
SUB1-213ENST00000515355 HIC2Q96JB3 615 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 APOLD1Q96LR9 279 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 LYSMD1Q96S90 227 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 TBL1YQ9BQ87 522 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 DUSP23Q9BVJ7 150 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 CLPBQ9H078 707 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 TMEM168Q9H0V1 697 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 SYNDIG1Q9H7V2 258 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 NLGN3Q9NZ94 848 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 ZNHIT2Q9UHR6 403 aa11.47□□□□□ -0.57
SUB1-213ENST00000515355 TDRD6O60522 2096 aaKnown RBP11.47□□□□□ -0.57
SUB1-213ENST00000515355 PRSS38A1L453 326 aa11.46□□□□□ -0.57
SUB1-213ENST00000515355 E7EVH7 732 aa11.46□□□□□ -0.57
SUB1-213ENST00000515355 RFPL3O75679 317 aa11.46□□□□□ -0.57
SUB1-213ENST00000515355 ZNF189O75820 626 aaPredicted RBP11.46□□□□□ -0.57
SUB1-213ENST00000515355 TRIM16O95361 564 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms