RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 MRPS34P82930 218 aaKnown RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CUL4AQ13619 759 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 INPP5JQ15735 1006 aaPredicted RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 DPCR1Q3MIW9 517 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 SYTL3Q4VX76 610 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 SLC9B1Q4ZJI4 515 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 ZKSCAN2Q63HK3 967 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 FAM205BPQ63HN1 556 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CADM3Q8N126 398 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 BEST2Q8NFU1 509 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 TTC14Q96N46 770 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 WDR77Q9BQA1 342 aaPredicted RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CLPBQ9H078 707 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 TMEM45AQ9NWC5 275 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 ASB6Q9NWX5 421 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 HEMK1Q9Y5R4 338 aaPredicted RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CENPJQ9HC77 1338 aaPredicted RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 A0A087WV48 116 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 GLOD5A6NK44 160 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 PI4K2BG5E9Z4 385 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 SIX3O95343 332 aaPredicted RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 GABRB1P18505 474 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 ICAM3P32942 547 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 SKIV2L2P42285 1042 aaKnown RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 RAD52P43351 418 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CCR9P51686 369 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 EFNA5P52803 228 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CDH8P55286 799 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CRYMQ14894 314 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 KPNB1Q14974 876 aaKnown RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 PCLAFQ15004 111 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CCDC30Q5VVM6 783 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 DHRS13Q6UX07 377 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 MTSS1LQ765P7 747 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 B4GALNT4Q76KP1 1039 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 PAF1Q8N7H5 531 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 TMEM116Q8NCL8 245 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 THAP6Q8TBB0 222 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 RBM17Q96I25 401 aaKnown RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 TMEM68Q96MH6 324 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 EIF2AK1Q9BQI3 630 aaKnown RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CLK4Q9HAZ1 481 aaKnown RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 FBRSL1Q9HCM7 1045 aaKnown RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 WDR6Q9NNW5 1121 aaKnown RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 MCM9Q9NXL9 1143 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 SH3BP4Q9P0V3 963 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 COPG2Q9UBF2 871 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 NENFQ9UMX5 172 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 PIAS3Q9Y6X2 628 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 PAPPA2Q9BXP8 1791 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CRB1P82279 1406 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 KCPQ6ZWJ8 1503 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 DUOX1Q9NRD9 1551 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CTAGE9A4FU28 777 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CHL1O00533 1208 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 GALTP07902 379 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CTAGE8P0CG41 777 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 ST6GAL1P15907 406 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 HOXD3P31249 432 aaPredicted RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 ARSFP54793 590 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CLDN2P57739 230 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 RPP30P78346 268 aaKnown RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 ILF3Q12906 894 aaKnown RBP eCLIP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 STIM1Q13586 685 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 GALNT3Q14435 633 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 ENTPD8Q5MY95 495 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 AKNAD1Q5T1N1 836 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 HEPHL1Q6MZM0 1159 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 TMEM71Q6P5X7 295 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 PDXDC1Q6P996 788 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 TMEM154Q6P9G4 183 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 SERPINA13PQ6UXR4 307 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 SEPT14Q6ZU15 432 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CTAGE4Q8IX94 777 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 HS6ST2Q96MM7 605 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 MKKSQ9NPJ1 570 aaPredicted RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 SNTG1Q9NSN8 517 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 ZNF70Q9UC06 446 aaPredicted RBP1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 GPR34Q9UPC5 381 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 MTMR6Q9Y217 621 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 CCL27Q9Y4X3 112 aa1.74□□□□□ -2.13
AC025539.1-201ENST00000515343 MANSC4A6NHS7 340 aaPredicted RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 LRRC53A6NM62 1247 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 A8MXE2 369 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CLGNO14967 610 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 EXOC3O60645 756 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 TMCC2O75069 709 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 KRT38O76015 456 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 DDNO94850 711 aaPredicted RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CLDN7O95471 211 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 TPOP07202 933 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ARSBP15848 533 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CHRNB2P17787 502 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 DEKP35659 375 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 NR4A2P43354 598 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 METAP2P50579 478 aaKnown RBP eCLIP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 RPS3AP61247 264 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 TFAP4Q01664 338 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CREB5Q02930 508 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 PKN2Q16513 984 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms