RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 LRCH3Q96II8 777 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 KCNK16Q96T55 309 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 FERMT1Q9BQL6 677 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 SLC39A3Q9BRY0 314 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 VN1R3Q9BXE9 311 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 SMOXQ9NWM0 555 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 ARHGEF38Q9NXL2 777 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 ARHGAP26Q9UNA1 814 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 PCDHA9Q9Y5H5 950 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 LINC00854A0A1B0GVQ3 168 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 WDR91A4D1P6 747 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 TKTP29401 623 aaKnown RBP7.42□□□□□ -1.22
CLIP1-205ENST00000514271 GJC1P36383 396 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 PTPN9P43378 593 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 EPHB3P54753 998 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 EPHA5P54756 1037 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 HYAL1Q12794 435 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 AQP6Q13520 282 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 TCEAL5Q5H9L2 206 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 COQ5Q5HYK3 327 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 ZCCHC23Q6ZST2 131 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 CRLF3Q8IUI8 442 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 PDIK1LQ8N165 341 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 ICA1LQ8NDH6 482 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 TSPAN14Q8NG11 270 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 OR52E4Q8NGH9 312 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 BPIFB1Q8TDL5 484 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 SLC39A7Q92504 469 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 SLC45A3Q96JT2 553 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 TTC1Q99614 292 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 GPR22Q99680 433 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 BCL7BQ9BQE9 202 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 ATP13A1Q9HD20 1204 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 CISHQ9NSE2 258 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 OBP2AQ9NY56 170 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 LUZP4Q9P127 313 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 USP18Q9UMW8 372 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 COPG1Q9Y678 874 aaKnown RBP7.42□□□□□ -1.22
CLIP1-205ENST00000514271 CROCCQ5TZA2 2017 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 HGSO14964 777 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 E2F6O75461 281 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 LRG1P02750 347 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 GNAO1P09471 354 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 PPARGP37231 505 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 BMXP51813 675 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 ERVFC1P60507 584 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 CAMK1Q14012 370 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 TRIM25Q14258 630 aaKnown RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 CA9Q16790 459 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 SEZ6Q53EL9 994 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 N4BP2L1Q5TBK1 243 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 GPR149Q86SP6 731 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 SPATA2LQ8IUW3 424 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 KREMEN2Q8NCW0 462 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 ACSF2Q96CM8 615 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 SMARCD1Q96GM5 515 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 MSANTD3Q96H12 275 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 HHIPQ96QV1 700 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 PKMYT1Q99640 499 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 UBE2ZQ9H832 354 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 COQ10BQ9H8M1 238 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 OSER1Q9NX31 292 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 MAP10Q9P2G4 905 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 SLC17A6Q9P2U8 582 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 HMGXB4Q9UGU5 601 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 I6L893 689 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 TEX28O15482 410 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 B4GALT3O60512 393 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 ARHGEF15O94989 841 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 CNPP09543 421 aaKnown RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 HAPLN1P10915 354 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 CPB1P15086 417 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 RXRGP48443 463 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 POLD2P49005 469 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 TKTL1P51854 596 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 PRKAA2P54646 552 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 NFKB2Q00653 900 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 ROR1Q01973 937 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 KRT81Q14533 505 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 PAFAH1B3Q15102 231 aaKnown RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 PHKG1Q16816 387 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 PYCR3Q53H96 274 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 RTP2Q5QGT7 225 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 SLX4IPQ5VYV7 408 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 LARP4Q71RC2 724 aaKnown RBP eCLIP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 CCDC80Q76M96 950 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 DET1Q7L5Y6 550 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 BMP8AQ7Z5Y6 402 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 POU5F2Q8N7G0 328 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 C3orf58Q8NDZ4 430 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 MYLIPQ8WY64 445 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 PLEKHA8Q96JA3 519 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 MSLNLQ96KJ4 702 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 TBCBQ99426 244 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 PRKD2Q9BZL6 878 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 POLR3BQ9NW08 1133 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 CACNA2D2Q9NY47 1150 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 RCOR3Q9P2K3 495 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 PPARGC1AQ9UBK2 798 aaKnown RBP7.41□□□□□ -1.22
CLIP1-205ENST00000514271 CNOT6Q9ULM6 557 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms