RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 AKR1B15C9JRZ8 316 aaPredicted RBP4.36□□□□□ -1.71
HTT-210ENST00000512909 MS4A18H0YCH9 400 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 SNAP23O00161 211 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 GTPBP1O00178 669 aaKnown RBP4.36□□□□□ -1.71
HTT-210ENST00000512909 EBAG9O00559 213 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 MDM4O15151 490 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 BCAT2O15382 392 aaPredicted RBP4.36□□□□□ -1.71
HTT-210ENST00000512909 TLX3O43711 291 aaPredicted RBP4.36□□□□□ -1.71
HTT-210ENST00000512909 MT-CYBP00156 380 aaPredicted RBP4.36□□□□□ -1.71
HTT-210ENST00000512909 IFNA2P01563 188 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 TFP02787 698 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 CLEC3BP05452 202 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 CD58P19256 250 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 EPHX2P34913 555 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 OLR1P78380 273 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 PRAMEP78395 509 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 NEDD9Q14511 834 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 CRYMQ14894 314 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 ETFDHQ16134 617 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 ZSCAN23Q3MJ62 389 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 EPHA10Q5JZY3 1008 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 Q5PR19 223 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 PAPD7Q5XG87 772 aaKnown RBP4.36□□□□□ -1.71
HTT-210ENST00000512909 MZT2BQ6NZ67 158 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 C1orf122Q6ZSJ8 110 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 TDRPQ86YL5 185 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 GJC3Q8NFK1 279 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 GABPB2Q8TAK5 448 aaPredicted RBP4.36□□□□□ -1.71
HTT-210ENST00000512909 DNAAF4Q8WXU2 420 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 TMEM18Q96B42 140 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 HMCESQ96FZ2 354 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 YME1L1Q96TA2 773 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 SF3B5Q9BWJ5 86 aaKnown RBP4.36□□□□□ -1.71
HTT-210ENST00000512909 KAT14Q9H8E8 782 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 DBNDD1Q9H9R9 158 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 SMYD2Q9NRG4 433 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 TBC1D22BQ9NU19 505 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 HAUS2Q9NVX0 235 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 ELOVL5Q9NYP7 299 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 DLGAP2Q9P1A6 1054 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 LYVE1Q9Y5Y7 322 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 TUBGCP6Q96RT7 1819 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 UTYO14607 1347 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 ABCC4O15439 1325 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 IL16Q14005 1332 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 MYH14Q7Z406 1995 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 PPEF2O14830 753 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 ASAP2O43150 1006 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 LIASO43766 372 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 CNOT3O75175 753 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 TSPAN9O75954 239 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 UFL1O94874 794 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 IPO7O95373 1038 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 TOP3BO95985 862 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 PCCAP05165 728 aaPredicted RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 PRF1P14222 555 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 CHRNB2P17787 502 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 MYF6P23409 242 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 EPS15P42566 896 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 PPP3CCP48454 512 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 CENPAP49450 140 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 SLC18A2Q05940 514 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 TMEM115Q12893 351 aaPredicted RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 CCDC142Q17RM4 750 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 CCDC57Q2TAC2 916 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 CRY2Q49AN0 593 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 FSCBQ5H9T9 825 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 PRAMEF19Q5SWL8 479 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 DCAF12L2Q5VW00 463 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 IKBIPQ70UQ0 350 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 PATL1Q86TB9 770 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 CADM3Q8N126 398 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 ADSSL1Q8N142 457 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 GPC2Q8N158 579 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 MIGA1Q8NAN2 632 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 OR4N2Q8NGD1 307 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 WIPF2Q8TF74 440 aaPredicted RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 FRAT1Q92837 279 aaPredicted RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 INTS12Q96CB8 462 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 FBXL8Q96CD0 374 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 COQ8BQ96D53 544 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 NR1H4Q96RI1 486 aaPredicted RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 BARD1Q99728 777 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 PIP5K1AQ99755 562 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 MXRA8Q9BRK3 442 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 TMEM79Q9BSE2 394 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 MMTAG2Q9BU76 263 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 MAK16Q9BXY0 300 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 POLDIP3Q9BY77 421 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 RBM38Q9H0Z9 239 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 KIF9Q9HAQ2 790 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 ANKRD10Q9NXR5 420 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 NDRG3Q9UGV2 375 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 FBXO9Q9UK97 447 aaPredicted RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 ABT1Q9ULW3 272 aaKnown RBP4.35□□□□□ -1.71
HTT-210ENST00000512909 MTMR6Q9Y217 621 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 RNF123Q5XPI4 1314 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 ZNF541Q9H0D2 1346 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 FANCIQ9NVI1 1328 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 ABCC12Q96J65 1359 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms