RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 PADI4Q9UM07 663 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 NEU3Q9UQ49 428 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 SIK3Q9Y2K2 1263 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 PCDHGA8Q9Y5G5 932 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 MYLKQ15746 1914 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 MAST4O15021 2626 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 TLN1Q9Y490 2541 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 AHCTF1Q8WYP5 2266 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 CCDC187A0A096LP49 1063 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 EPHB6O15197 1021 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 KLK10O43240 276 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 DAPK3O43293 454 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 CCP110O43303 1012 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 GCATO75600 419 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 RASGRP1O95267 797 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 GJB6O95452 261 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 TSHRP16473 764 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 FERP16591 822 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 KELP23276 732 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 HK3P52790 923 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 TPI1P60174 286 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 POLR2LP62875 67 aaKnown RBP7.23□□□□□ -1.25
USP46-208ENST00000512656 MYL5Q02045 173 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 EIF3IQ13347 325 aaKnown RBP7.23□□□□□ -1.25
USP46-208ENST00000512656 C1orf61Q13536 156 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 IRF4Q15306 451 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 UGP2Q16851 508 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 LRRC73Q5JTD7 316 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 TPRG1LQ5T0D9 272 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 ACAD10Q6JQN1 1059 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 CLEC17AQ6ZS10 378 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 MON1BQ7L1V2 547 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 HID1Q8IV36 788 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 SLC35F3Q8IY50 421 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 RBFAQ8N0V3 343 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 PYROXD2Q8N2H3 581 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 ARL10Q8N8L6 244 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 TP53I13Q8NBR0 393 aaPredicted RBP7.23□□□□□ -1.25
USP46-208ENST00000512656 ATXN7L3BQ96GX2 97 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 SLC46A1Q96NT5 459 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 MCEEQ96PE7 176 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 TUBGCP5Q96RT8 1024 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 PCDHB18PQ96TA0 734 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 CCDC3Q9BQI4 270 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 TRIM56Q9BRZ2 755 aaKnown RBP7.23□□□□□ -1.25
USP46-208ENST00000512656 LRRC61Q9BV99 259 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 MAGEB5Q9BZ81 275 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 EDEM3Q9BZQ6 932 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 STRADBQ9C0K7 418 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 NOL6Q9H6R4 1146 aaKnown RBP7.23□□□□□ -1.25
USP46-208ENST00000512656 ATP13A3Q9H7F0 1226 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 SYNDIG1Q9H7V2 258 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 PCDH12Q9NPG4 1184 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 ASCL3Q9NQ33 180 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 MBNL1Q9NR56 388 aaKnown RBP7.23□□□□□ -1.25
USP46-208ENST00000512656 FANCLQ9NW38 375 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 GULP1Q9UBP9 304 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 LIMA1Q9UHB6 759 aaKnown RBP7.23□□□□□ -1.25
USP46-208ENST00000512656 FZD10Q9ULW2 581 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 SATB2Q9UPW6 733 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 ACTL7BQ9Y614 415 aa7.23□□□□□ -1.25
USP46-208ENST00000512656 COL6A6A6NMZ7 2263 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 TSPAN11A1L157 253 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 CFAP69A5D8W1 941 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 GOLGA6L22H0YM25 854 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 CACNB4O00305 520 aaPredicted RBP7.22□□□□□ -1.25
USP46-208ENST00000512656 EEF2KO00418 725 aaKnown RBP7.22□□□□□ -1.25
USP46-208ENST00000512656 PRAMEF11O60813 436 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 RNF8O76064 485 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 PIGNO95427 931 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 TNFP01375 233 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 PRB1P04280 392 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 C6P13671 934 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 TNFAIP3P21580 790 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 NFKBIAP25963 317 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 SERPINA4P29622 427 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 CSNK1DP48730 415 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 LIG3P49916 1009 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 ZNF135P52742 658 aaPredicted RBP7.22□□□□□ -1.25
USP46-208ENST00000512656 SRP54P61011 504 aaKnown RBP7.22□□□□□ -1.25
USP46-208ENST00000512656 RPL7AP62424 266 aaKnown RBP7.22□□□□□ -1.25
USP46-208ENST00000512656 CFHR1Q03591 330 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 MTM1Q13496 603 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 NFATC4Q14934 902 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 CYTH1Q15438 398 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 STX1AQ16623 288 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 WSCD2Q2TBF2 565 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 ARHGAP40Q5TG30 622 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 TMCO4Q5TGY1 634 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 RD3Q7Z3Z2 195 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 ZNF605Q86T29 641 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 SRLQ86TD4 932 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 MCOLN2Q8IZK6 566 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 VOPP1Q96AW1 172 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 ALKBH8Q96BT7 664 aaKnown RBP7.22□□□□□ -1.25
USP46-208ENST00000512656 LIN37Q96GY3 246 aaPredicted RBP7.22□□□□□ -1.25
USP46-208ENST00000512656 EXOC2Q96KP1 924 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 WDR92Q96MX6 357 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 GBP4Q96PP9 640 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms