RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PHPT1Q9NRX4 125 aaPredicted RBP13.25□□□□□ -0.29
RNF4-215ENST00000511843 RABGEF1Q9UJ41 708 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 PADI4Q9UM07 663 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 RAXQ9Y2V3 346 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 TMEM98Q9Y2Y6 226 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 ADAMTS20P59510 1910 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 UNC13CQ8NB66 2214 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 B4DGG1 531 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 ANKRD66B4E2M5 251 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 PMPCBO75439 489 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 GP1BAP07359 652 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 HOXC4P09017 264 aaPredicted RBP13.24□□□□□ -0.29
RNF4-215ENST00000511843 ZNF30P17039 623 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 NFKB1P19838 968 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 CDC25BP30305 580 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 CD68P34810 354 aaPredicted RBP13.24□□□□□ -0.29
RNF4-215ENST00000511843 CTNNA1P35221 906 aaKnown RBP13.24□□□□□ -0.29
RNF4-215ENST00000511843 GNPDA1P46926 289 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 NR2C2P49116 596 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 DPTQ07507 201 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 NOMO1Q15155 1222 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 TEX44Q53QW1 395 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 CDCP2Q5VXM1 449 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 BBS12Q6ZW61 710 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 MARK2Q7KZI7 788 aaKnown RBP13.24□□□□□ -0.29
RNF4-215ENST00000511843 GKN2Q86XP6 184 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 LRRC57Q8N9N7 239 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 KIAA1524Q8TCG1 905 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 EID2BQ96D98 161 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 WDR24Q96S15 920 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 MLPHQ9BV36 600 aaPredicted RBP13.24□□□□□ -0.29
RNF4-215ENST00000511843 SLC25A51Q9H1U9 297 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 USP29Q9HBJ7 922 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 RALYQ9UKM9 306 aaKnown RBP13.24□□□□□ -0.29
RNF4-215ENST00000511843 SUFUQ9UMX1 484 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 PACSIN2Q9UNF0 486 aaPredicted RBP13.24□□□□□ -0.29
RNF4-215ENST00000511843 SHOC2Q9UQ13 582 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.24□□□□□ -0.29
RNF4-215ENST00000511843 PLEKHM1Q9Y4G2 1056 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 PCDHA3Q9Y5H8 950 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 ST14Q9Y5Y6 855 aa13.24□□□□□ -0.29
RNF4-215ENST00000511843 DSPP15924 2871 aaKnown RBP13.24□□□□□ -0.29
RNF4-215ENST00000511843 APC2O95996 2303 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 BTNL10A8MVZ5 291 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 PDE2AO00408 941 aaPredicted RBP13.23□□□□□ -0.29
RNF4-215ENST00000511843 TNFRSF10CO14798 259 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 PJA2O43164 708 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 CSO75390 466 aaKnown RBP13.23□□□□□ -0.29
RNF4-215ENST00000511843 ATP1A1P05023 1023 aaKnown RBP13.23□□□□□ -0.29
RNF4-215ENST00000511843 AK4P27144 223 aaPredicted RBP13.23□□□□□ -0.29
RNF4-215ENST00000511843 RPIAP49247 311 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 RPL26P61254 145 aaKnown RBP13.23□□□□□ -0.29
RNF4-215ENST00000511843 PPP2R5EQ16537 467 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 ALS2CLQ60I27 953 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 NRROSQ86YC3 692 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 ZNF567Q8N184 647 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 ARL10Q8N8L6 244 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 FAM46DQ8NEK8 389 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 SCG3Q8WXD2 468 aaKnown RBP13.23□□□□□ -0.29
RNF4-215ENST00000511843 GLMNQ92990 594 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 CCDC74AQ96AQ1 378 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 TADA1Q96BN2 335 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 TEKT5Q96M29 485 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 QKIQ96PU8 341 aaKnown RBP eCLIP13.23□□□□□ -0.29
RNF4-215ENST00000511843 LYSMD1Q96S90 227 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 CCDC3Q9BQI4 270 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 ADGRE3Q9BY15 652 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 EVA1BQ9NVM1 165 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 NCKIPSDQ9NZQ3 722 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 KLHL8Q9P2G9 620 aaPredicted RBP13.23□□□□□ -0.29
RNF4-215ENST00000511843 IMPACTQ9P2X3 320 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 RPL26L1Q9UNX3 145 aaKnown RBP13.23□□□□□ -0.29
RNF4-215ENST00000511843 PRKAB1Q9Y478 270 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 SPO11Q9Y5K1 396 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 PCYT1BQ9Y5K3 369 aaPredicted RBP13.23□□□□□ -0.29
RNF4-215ENST00000511843 AK5Q9Y6K8 562 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 ACACAQ13085 2346 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 NBEAQ8NFP9 2946 aa13.23□□□□□ -0.29
RNF4-215ENST00000511843 FADS2P1A8MWK0 482 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 H7C0C1 242 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 AURKAO14965 403 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 NOBOXO60393 691 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 FTCDO95954 541 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 CTNNA2P26232 953 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 RBL1P28749 1068 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 CHRNA4P43681 627 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 ATP5OP48047 213 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 SPINT3P49223 89 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 OTUD4Q01804 1114 aaKnown RBP13.22□□□□□ -0.29
RNF4-215ENST00000511843 CDK18Q07002 472 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 CCDC181Q5TID7 509 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 SLC30A9Q6PML9 568 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 LVRNQ6Q4G3 990 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 ADAMTSL4Q6UY14 1074 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 ZNF765Q7L2R6 523 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 PID1Q7Z2X4 250 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 HTR3CQ8WXA8 447 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 NXPE2Q96DL1 559 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 OXNAD1Q96HP4 312 aaPredicted RBP13.22□□□□□ -0.29
RNF4-215ENST00000511843 DPEP2Q9H4A9 486 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms