RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PYCR3Q53H96 274 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 COLEC12Q5KU26 742 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 XKR5Q6UX68 686 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 TIPARPQ7Z3E1 657 aaKnown RBP15.85■□□□□ 0.13
RAB40C-202ENST00000509637 PTRH1Q86Y79 214 aaKnown RBP15.85■□□□□ 0.13
RAB40C-202ENST00000509637 KIAA1524Q8TCG1 905 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 RNF31Q96EP0 1072 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 ARHGAP9Q9BRR9 750 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 RTN4Q9NQC3 1192 aaKnown RBP15.85■□□□□ 0.13
RAB40C-202ENST00000509637 PDP2Q9P2J9 529 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 MYO1AQ9UBC5 1043 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 PRKAB1Q9Y478 270 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 OAS3Q9Y6K5 1087 aaKnown RBP15.85■□□□□ 0.13
RAB40C-202ENST00000509637 COL12A1Q99715 3063 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 PTPN13Q12923 2485 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 HGSO14964 777 aaPredicted RBP15.84■□□□□ 0.13
RAB40C-202ENST00000509637 NKX2-8O15522 239 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 DUX1O43812 170 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 TPM2P07951 284 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 CD48P09326 243 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 TEAD1P28347 426 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 ACTR1BP42025 376 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 GPR3P46089 330 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 ACTR1AP61163 376 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 DPTQ07507 201 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 ILF3Q12906 894 aaKnown RBP eCLIP15.84■□□□□ 0.13
RAB40C-202ENST00000509637 TSR1Q2NL82 804 aaKnown RBP15.84■□□□□ 0.13
RAB40C-202ENST00000509637 LRRC66Q68CR7 880 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 ANKS6Q68DC2 871 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 RAET1GQ6H3X3 334 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 ATG14Q6ZNE5 492 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 MARK2Q7KZI7 788 aaKnown RBP15.84■□□□□ 0.13
RAB40C-202ENST00000509637 PSTKQ8IV42 348 aaKnown RBP15.84■□□□□ 0.13
RAB40C-202ENST00000509637 TEX26Q8N6G2 289 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 AOPEPQ8N6M6 819 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 OR4D9Q8NGE8 314 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 SLC37A2Q8TED4 501 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 HSPH1Q92598 858 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 COX14Q96I36 57 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 NAP1L5Q96NT1 182 aaPredicted RBP15.84■□□□□ 0.13
RAB40C-202ENST00000509637 ZWILCHQ9H900 591 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 PCDH18Q9HCL0 1135 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 DONSONQ9NYP3 566 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 AIPL1Q9NZN9 384 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 SEPT10Q9P0V9 454 aa15.84■□□□□ 0.13
RAB40C-202ENST00000509637 PDE2AO00408 941 aaPredicted RBP15.83■□□□□ 0.12
RAB40C-202ENST00000509637 DNAJC6O75061 913 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 RNF8O76064 485 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 GZMAP12544 262 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 CD82P27701 267 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 PRKCIP41743 596 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 ARSEP51690 589 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 NIPAL4Q0D2K0 466 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 ZNF235Q14590 738 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 SKIDA1Q1XH10 827 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 ATP13A4Q4VNC1 1196 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.83■□□□□ 0.12
RAB40C-202ENST00000509637 ADAMTSL4Q6UY14 1074 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 LZTR1Q8N653 840 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 ZNF653Q96CK0 615 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 CTRCQ99895 268 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 ISCUQ9H1K1 167 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 SLC25A18Q9H1K4 315 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 APMAPQ9HDC9 416 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 NT5MQ9NPB1 228 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 ANO10Q9NW15 660 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 PILRAQ9UKJ1 303 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 PCDHB11Q9Y5F2 797 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 HEMK1Q9Y5R4 338 aaPredicted RBP15.83■□□□□ 0.12
RAB40C-202ENST00000509637 NBASA2RRP1 2371 aa15.83■□□□□ 0.12
RAB40C-202ENST00000509637 LOC101059948A0A1B0GTJ6 334 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 GOLGA6CA6NDK9 693 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 GOLGA6BA6NDN3 693 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 EFCAB7A8K855 629 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 STMND1H3BQB6 276 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 H3BRJ5 948 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 PSMD11O00231 422 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 INPP4BO15327 924 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 MAP3K6O95382 1288 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 ATP1A1P05023 1023 aaKnown RBP15.82■□□□□ 0.12
RAB40C-202ENST00000509637 GOLGA6DP0CG33 693 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 CDK11BP21127 795 aaKnown RBP15.82■□□□□ 0.12
RAB40C-202ENST00000509637 PCK1P35558 622 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 MMP13P45452 471 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 GPR1P46091 355 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 STC1P52823 247 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 DSC2Q02487 901 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 SLC25A11Q02978 314 aaKnown RBP15.82■□□□□ 0.12
RAB40C-202ENST00000509637 TLE1Q04724 770 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 ASIC2Q16515 512 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 TMEM71Q6P5X7 295 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 ARHGAP22Q7Z5H3 698 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 UNC5BQ8IZJ1 945 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 SFRP1Q8N474 314 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.82■□□□□ 0.12
RAB40C-202ENST00000509637 PAF1Q8N7H5 531 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 ARRDC2Q8TBH0 407 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 OR2M4Q96R27 311 aa15.82■□□□□ 0.12
RAB40C-202ENST00000509637 RIOK2Q9BVS4 552 aaKnown RBP15.82■□□□□ 0.12
RAB40C-202ENST00000509637 CDH19Q9H159 772 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms