RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 CEP97Q8IW35 865 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 HSCBQ8IWL3 235 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 CEP57L1Q8IYX8 460 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 SCML4Q8N228 414 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 USP38Q8NB14 1042 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 AVL9Q8NBF6 648 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 MSANTD4Q8NCY6 345 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 Q8NFD4 153 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 OR8H1Q8NGG4 311 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 GOT1L1Q8NHS2 421 aaPredicted RBP2.11□□□□□ -2.07
XRCC4-204ENST00000509268 LNX1Q8TBB1 728 aaPredicted RBP2.11□□□□□ -2.07
XRCC4-204ENST00000509268 METTL6Q8TCB7 284 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 MGARPQ8TDB4 240 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 PERPQ96FX8 193 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 CALML4Q96GE6 196 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 TSPAN18Q96SJ8 248 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 ASCL2Q99929 193 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 NCAPGQ9BPX3 1015 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 FUZQ9BT04 418 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 EDEM3Q9BZQ6 932 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 WDR13Q9H1Z4 485 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 MUC13Q9H3R2 512 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 HIPK3Q9H422 1215 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 SYNCQ9H7C4 482 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 ZWILCHQ9H900 591 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 GRPEL1Q9HAV7 217 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 DIAPH3Q9NSV4 1193 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 FAM120CQ9NX05 1096 aaKnown RBP2.11□□□□□ -2.07
XRCC4-204ENST00000509268 PAK5Q9P286 719 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 CNTN6Q9UQ52 1028 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 TMEM5Q9Y2B1 443 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 FLT1P17948 1338 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 KDM3AQ9Y4C1 1321 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 AGRNO00468 2067 aa2.11□□□□□ -2.07
XRCC4-204ENST00000509268 GREB1LQ9C091 1923 aaPredicted RBP2.11□□□□□ -2.07
XRCC4-204ENST00000509268 NPIPB15A6NHN6 443 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 KIF28PB7ZC32 967 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PTGES3LE9PB15 166 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 H0Y626 953 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 SH2B2O14492 632 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 NKX2-8O15522 239 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TNFSF14O43557 240 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TAF5LO75529 589 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TMCC1O94876 653 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 BAG2O95816 211 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 CH25HO95992 272 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 VIPP01282 170 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PTMAP06454 111 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 WEE2P0C1S8 567 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 HSPA1AP0DMV8 641 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 HSPA1BP0DMV9 641 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 UBL4AP11441 157 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PSMA4P25789 261 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 ICAM3P32942 547 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 ARL3P36405 182 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PGM1P36871 562 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 GARSP41250 739 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 CLCN3P51790 818 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 RBM5P52756 815 aaKnown RBP eCLIP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 RPP30P78346 268 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 EPS8Q12929 822 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PTP4A2Q12974 167 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 DHX34Q14147 1143 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 DCTN1Q14203 1278 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 KYNUQ16719 465 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TMEM266Q2M3C6 531 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 MMEL1Q495T6 779 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 ZNF876PQ49A33 203 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 DGAT2L7PQ6IED9 249 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 IKBIPQ70UQ0 350 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 LRRC8DQ7L1W4 858 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 LMNTD2Q8IXW0 634 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 OR8H3Q8N146 312 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 WDTC1Q8N5D0 677 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 KBTBD3Q8NAB2 608 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 LSM14AQ8ND56 463 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 DMBX1Q8NFW5 382 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 LINS1Q8NG48 757 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 NFKBIDQ8NI38 313 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 FAM222BQ8WU58 562 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 NCSTNQ92542 709 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TBC1D31Q96DN5 1066 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 KTI12Q96EK9 354 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 MCRS1Q96EZ8 462 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 SPATA17Q96L03 361 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 MYCBPQ99417 103 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 EYA3Q99504 573 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 MECRQ9BV79 373 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 HERC2P3Q9BVR0 1158 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 BRD8Q9H0E9 1235 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 C2orf40Q9H1Z8 148 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TTYH1Q9H313 450 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 NDST4Q9H3R1 872 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TRPV4Q9HBA0 871 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 XAB2Q9HCS7 855 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PDE7BQ9NP56 450 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 NDUFAF4Q9P032 175 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 C5AR2Q9P296 337 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 MTRRQ9UBK8 725 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 SEL1LQ9UBV2 794 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms