RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 TMLHEQ9NVH6 421 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 ALKBH4Q9NXW9 302 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 SMPD3Q9NY59 655 aaPredicted RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 MPP6Q9NZW5 540 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 DNAJB11Q9UBS4 358 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 MALT1Q9UDY8 824 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 CDH22Q9UJ99 828 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 BAG5Q9UL15 447 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 GABRQQ9UN88 632 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 STX8Q9UNK0 236 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 CDYLQ9Y232 598 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 TDRKHQ9Y2W6 561 aaKnown RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 SNX14Q9Y5W7 946 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 ACTL7AQ9Y615 435 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 ZCCHC6Q5VYS8 1495 aaKnown RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 LOC102723996A0A087X1L8 192 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 TEX13CA0A0J9YWL9 993 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 A0A1B0GWJ7 208 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 HTR3EA5X5Y0 456 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 MYADML2A6NDP7 307 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 OOEPA6NGQ2 149 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 ANXA2P2A6NMY6 339 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 KDM4EB2RXH2 506 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 E9PBE3 544 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 EBAG9O00559 213 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 MAPK13O15264 365 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 ADCY6O43306 1168 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 SMAD6O43541 496 aaKnown RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 NUDT21O43809 227 aaKnown RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CCNT2O60583 730 aaKnown RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 PAGE4O60829 102 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 ZNF821O75541 412 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 ITGA10O75578 1167 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CDKL5O76039 1030 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 RASAL1O95294 804 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 AK1P00568 194 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 GBAP04062 536 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 S100A9P06702 114 aaKnown RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 FGF4P08620 206 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 FAM58BPP0C7Q3 252 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 PCNAP12004 261 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 SFPQP23246 707 aaKnown RBP eCLIP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 NR2F2P24468 414 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CD27P26842 260 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CPOXP36551 454 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 ARL1P40616 181 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 PNPLA4P41247 253 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 EPS15P42566 896 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 RAB28P51157 221 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CLCNKBP51801 687 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CHN2P52757 468 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 SNU13P55769 128 aaKnown RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 HAND2P61296 217 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 MEF2AQ02078 507 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 SP2Q02086 613 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 GFPT1Q06210 699 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 SLFN5Q08AF3 891 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 NIPAL4Q0D2K0 466 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 PPIGQ13427 754 aaKnown RBP eCLIP4.34□□□□□ -1.713e-8■■□□□ 12.5
SMARCA5-202ENST00000508573 THOC5Q13769 683 aaKnown RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 GALNT3Q14435 633 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 PGM5Q15124 567 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CEBPEQ15744 281 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CLPPQ16740 277 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 PFKFB3Q16875 520 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 FILIP1LQ4L180 1135 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 PLA1AQ53H76 456 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 C19orf54Q5BKX5 351 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 ARHGAP40Q5TG30 622 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 MSANTD2Q6P1R3 559 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 NEK5Q6P3R8 708 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 TRIM72Q6ZMU5 477 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CAMKMTQ7Z624 323 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 WDR49Q8IV35 697 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 KLHL7Q8IXQ5 586 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 ZNF679Q8IYX0 411 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 ABRAQ8N0Z2 381 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 MMP21Q8N119 569 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 KDM8Q8N371 416 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 BBS5Q8N3I7 341 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 PTGR2Q8N8N7 351 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 PSMA8Q8TAA3 256 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 SLC2A12Q8TD20 617 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 LRRC8CQ8TDW0 803 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 HDAC11Q96DB2 347 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 C8orf76Q96K31 380 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 KLHL15Q96M94 604 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 Q96MF0 132 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 C5orf34Q96MH7 638 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 MAP7D2Q96T17 732 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CD180Q99467 661 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 PKP2Q99959 881 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CCDC77Q9BR77 488 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 TLR10Q9BXR5 811 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 FAM212BQ9NTI7 297 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 GDE1Q9NZC3 331 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 ANKMY1Q9P2S6 941 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 DNMT3BQ9UBC3 853 aaKnown RBP4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 CD207Q9UJ71 328 aa4.34□□□□□ -1.71
SMARCA5-202ENST00000508573 RUVBL1Q9Y265 456 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms