RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 C1orf61Q13536 156 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 LLGL1Q15334 1064 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 CDKN3Q16667 212 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 HES3Q5TGS1 186 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 PDPK2PQ6A1A2 396 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 ZNF662Q6ZS27 426 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 PID1Q7Z2X4 250 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 ACTL9Q8TC94 416 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 ALG3Q92685 438 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 LRRC45Q96CN5 670 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 GRAMD1AQ96CP6 724 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 LGR4Q9BXB1 951 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 ABCG4Q9H172 646 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 FAM83DQ9H4H8 585 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 CYP4F12Q9HCS2 524 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 GOLGA6AQ9NYA3 693 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 DKK4Q9UBT3 224 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 CLCA2Q9UQC9 943 aa19.81■□□□□ 0.76
SFXN1-209ENST00000508290 LRRK1Q38SD2 2015 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 LY6G6EA0A0G2JKS1 128 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 ANXA9O76027 345 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 IVLP07476 585 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 PYGMP11217 842 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 NFKB1P19838 968 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 OTUD4Q01804 1114 aaKnown RBP19.8■□□□□ 0.76
SFXN1-209ENST00000508290 ILF3Q12906 894 aaKnown RBP eCLIP19.8■□□□□ 0.76
SFXN1-209ENST00000508290 GALNT3Q14435 633 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 PCSK7Q16549 785 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 ZNF567Q8N184 647 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 IFI44Q8TCB0 444 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 SCARF2Q96GP6 870 aaPredicted RBP19.8■□□□□ 0.76
SFXN1-209ENST00000508290 HES6Q96HZ4 224 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 HIC2Q96JB3 615 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 GSDMCQ9BYG8 508 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 HACD3Q9P035 362 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 VPS18Q9P253 973 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 U3KQA8 63 aa19.8■□□□□ 0.76
SFXN1-209ENST00000508290 LOC285095A0A1B0GVY8 99 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 OPA1O60313 960 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 PMPCBO75439 489 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 MT-CYBP00156 380 aaPredicted RBP19.79■□□□□ 0.76
SFXN1-209ENST00000508290 CEACAM5P06731 702 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 CCDC175P0C221 793 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 RBP3P10745 1247 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 HLA-DPA1P20036 260 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 CD68P34810 354 aaPredicted RBP19.79■□□□□ 0.76
SFXN1-209ENST00000508290 EIF3EP60228 445 aaKnown RBP19.79■□□□□ 0.76
SFXN1-209ENST00000508290 INSM1Q01101 510 aaPredicted RBP19.79■□□□□ 0.76
SFXN1-209ENST00000508290 HENMT1Q5T8I9 393 aaKnown RBP19.79■□□□□ 0.76
SFXN1-209ENST00000508290 ZDHHC20Q5W0Z9 365 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 TAF8Q7Z7C8 310 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 SLC35F3Q8IY50 421 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 PELI3Q8N2H9 469 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 DCBLD1Q8N8Z6 715 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 SPATA22Q8NHS9 363 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 ZCCHC14Q8WYQ9 949 aaKnown RBP19.79■□□□□ 0.76
SFXN1-209ENST00000508290 NXPE2Q96DL1 559 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 RIOK2Q9BVS4 552 aaKnown RBP19.79■□□□□ 0.76
SFXN1-209ENST00000508290 GBA3Q9H227 469 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 RMI1Q9H9A7 625 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 CARS2Q9HA77 564 aaKnown RBP19.79■□□□□ 0.76
SFXN1-209ENST00000508290 RSPH14Q9UHP6 348 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 MOSPD1Q9UJG1 213 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 GPR34Q9UPC5 381 aa19.79■□□□□ 0.76
SFXN1-209ENST00000508290 AAR2Q9Y312 384 aaKnown RBP19.79■□□□□ 0.76
SFXN1-209ENST00000508290 ARID1BQ8NFD5 2236 aaPredicted RBP19.78■□□□□ 0.76
SFXN1-209ENST00000508290 TCEA3O75764 348 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 SOD1P00441 154 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 RBL1P28749 1068 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 WNT3AP56704 352 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 CAMK2BQ13554 666 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 LRP8Q14114 963 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 PRPSAP1Q14558 356 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 PTPRRQ15256 657 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 KDELC1Q6UW63 502 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 EFL1Q7Z2Z2 1120 aaKnown RBP19.78■□□□□ 0.76
SFXN1-209ENST00000508290 LYSMD3Q7Z3D4 306 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 TMC3Q7Z5M5 1100 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 MAPK15Q8TD08 544 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 GPBAR1Q8TDU6 330 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 SCAMP4Q969E2 229 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 COX14Q96I36 57 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 DEPDC7Q96QD5 511 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 ZSCAN5AQ9BUG6 496 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 FSD1LQ9BXM9 530 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 GPR63Q9BZJ6 419 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 NRSN2Q9GZP1 204 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 CCDC86Q9H6F5 360 aaKnown RBP19.78■□□□□ 0.76
SFXN1-209ENST00000508290 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.78■□□□□ 0.765e-6■□□□□ 10.9
SFXN1-209ENST00000508290 TRIM10Q9UDY6 481 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 CD84Q9UIB8 345 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 PADI4Q9UM07 663 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 ZNF711Q9Y462 761 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 CAPN6Q9Y6Q1 641 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 EPG5Q9HCE0 2579 aa19.78■□□□□ 0.76
SFXN1-209ENST00000508290 CPED1A4D0V7 1026 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 GPR89AB7ZAQ6 455 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 PPFIA2O75334 1257 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 FTCDO95954 541 aa19.77■□□□□ 0.76
SFXN1-209ENST00000508290 FGF1P05230 155 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms