RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 LNPEPQ9UIQ6 1025 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 MAFFQ9ULX9 164 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 ARHGAP26Q9UNA1 814 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 ZNF711Q9Y462 761 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 WNT6Q9Y6F9 365 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 PIKFYVEQ9Y2I7 2098 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 TMEM114B3SHH9 223 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 PGLSO95336 258 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 SIX3O95343 332 aaPredicted RBP12.17□□□□□ -0.46
LIN54-206ENST00000506560 APOA4P06727 396 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 SRCP12931 536 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 CD1DP15813 335 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 WEE1P30291 646 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 XIAPP98170 497 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 PITRM1Q5JRX3 1037 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 CTSL3PQ5NE16 218 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 FAM45BPQ6NSW5 357 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 RFLNAQ6ZTI6 216 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 GALNT7Q86SF2 657 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 RBM15BQ8NDT2 890 aaKnown RBP12.17□□□□□ -0.46
LIN54-206ENST00000506560 GIMAP7Q8NHV1 300 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 RDH11Q8TC12 318 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 FAM45AQ8TCE6 357 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 INPP5DQ92835 1189 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 GPR21Q99679 349 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 ADGRE3Q9BY15 652 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 MTG2Q9H4K7 406 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 DNAJC28Q9NX36 388 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 NCKIPSDQ9NZQ3 722 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 IL17CQ9P0M4 197 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 APOBEC2Q9Y235 224 aaKnown RBP12.17□□□□□ -0.46
LIN54-206ENST00000506560 SSX2IPQ9Y2D8 614 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 GBF1Q92538 1859 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 B2RBV5 119 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 MATN2O00339 956 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 GAPDHSO14556 408 aaPredicted RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 CHUKO15111 745 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 DCXO43602 365 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 SRP72O76094 671 aaKnown RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 CLDN7O95471 211 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 OGNP20774 298 aaKnown RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 ATP5F1P24539 256 aaPredicted RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 CDH13P55290 713 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 KRT72Q14CN4 511 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 TSNAXIP1Q2TAA8 658 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 AGAP9Q5VTM2 703 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 TMEM215Q68D42 235 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 AFTPHQ6ULP2 937 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 FAM151BQ6UXP7 276 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 KDM1BQ8NB78 822 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 AGAP11Q8TF27 550 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 ILKAPQ9H0C8 392 aaPredicted RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 ABCG8Q9H221 673 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 PRUNE2Q8WUY3 3088 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 LOC100653049A0A140TA62 436 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 UBXN8O00124 270 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 UBFD1O14562 309 aaKnown RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 GSC2O15499 205 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 SKAP2O75563 359 aaPredicted RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 ATP5HO75947 161 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 KRT34O76011 436 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 RHOBTB1O94844 696 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 CA3P07451 260 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 CEBPBP17676 345 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 CALB2P22676 271 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 RPL14P50914 215 aaKnown RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 CFAP157Q5JU67 520 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 LY6G5CQ5SRR4 150 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 ARMC12Q5T9G4 340 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 RETSATQ6NUM9 610 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 PAF1Q8N7H5 531 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 SIDT2Q8NBJ9 832 aaKnown RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 HERVK_113Q902F9 699 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 PEX13Q92968 403 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 NSUN5Q96P11 429 aaKnown RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 BTBD10Q9BSF8 475 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 BOCQ9BWV1 1114 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 BBS2Q9BXC9 721 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 GPR63Q9BZJ6 419 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 KIAA1522Q9P206 1035 aaPredicted RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 RAP2CQ9Y3L5 183 aa12.16□□□□□ -0.46
LIN54-206ENST00000506560 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.16□□□□□ -0.46
LIN54-206ENST00000506560 A0A1B0GTL3 188 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 CLASP2O75122 1294 aaKnown RBP12.15□□□□□ -0.46
LIN54-206ENST00000506560 ENTPD5O75356 428 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 NDUFS3O75489 264 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 IPO13O94829 963 aaKnown RBP12.15□□□□□ -0.46
LIN54-206ENST00000506560 MTHFD2P13995 350 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 UGT1A6P19224 532 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 UGT1A1P22309 533 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 UGT1A4P22310 534 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 UGT1A3P35503 534 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 UGT1A5P35504 534 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 C1QTNF8P60827 252 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 MESP2Q0VG99 397 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 SNCBQ16143 134 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 LSM12Q3MHD2 195 aaKnown RBP12.15□□□□□ -0.46
LIN54-206ENST00000506560 ACCSLQ4AC99 568 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 SH2D4BQ5SQS7 431 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 TRIM68Q6AZZ1 485 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms