RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CENPOQ9BU64 300 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 PRRG3Q9BZD7 231 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 SPATC1LQ9H0A9 340 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 TOR3AQ9H497 397 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 ATP13A3Q9H7F0 1226 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 AGPAT4Q9NRZ5 378 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 PIGVQ9NUD9 493 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 SYNPO2Q9UMS6 1093 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 VPS4AQ9UN37 437 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 PCDHGA8Q9Y5G5 932 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 SNX5Q9Y5X3 404 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 SHROOM3Q8TF72 1996 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 MDM4O15151 490 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 JRKO75564 520 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 HSPA1AP0DMV8 641 aaKnown RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 HSPA1BP0DMV9 641 aaKnown RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 AXLP30530 894 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 NR2C2P49116 596 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 CCT8P50990 548 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 AP3M2P53677 418 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 OR4D2P58180 307 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 VGLL4Q14135 290 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 FRG1Q14331 258 aaKnown RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 CCNYL2Q5T2Q4 361 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 XRRA1Q6P2D8 792 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 TMEM135Q86UB9 458 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 ERO1BQ86YB8 467 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 TMEM126BQ8IUX1 230 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 ANKRD13AQ8IZ07 590 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 FRS2Q8WU20 508 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 KCNN1Q92952 543 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 TMBIM1Q969X1 311 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 C19orf60Q96EN9 201 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 CAMKK2Q96RR4 588 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 SLC30A3Q99726 388 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 NAT9Q9BTE0 207 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 C2orf40Q9H1Z8 148 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 ABCG8Q9H221 673 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 RHOJQ9H4E5 214 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 VTA1Q9NP79 307 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 RASSF1Q9NS23 344 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 SETD4Q9NVD3 440 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 KIAA1522Q9P206 1035 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 ANAPC2Q9UJX6 822 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 VPS28Q9UK41 221 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 CNOT11Q9UKZ1 510 aaKnown RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 SOBPA7XYQ1 873 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 SNPHO15079 494 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 CNTN5O94779 1100 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 AP2A1O95782 977 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 FADS2O95864 444 aaKnown RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 MOCS2O96007 188 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 FTH1P02794 183 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 CYP2C8P10632 490 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 MBL2P11226 248 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 BMP4P12644 408 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 MLNP12872 115 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 GFAPP14136 432 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 ALOX12P18054 663 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 SLC6A2P23975 617 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 CD151P48509 253 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 TRPC1P48995 793 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 SH3BP2P78314 561 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 CACNB2Q08289 660 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 MAPRE2Q15555 327 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 UGT3A2Q3SY77 523 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 NOL9Q5SY16 702 aaKnown RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 DEPDC1Q5TB30 811 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 BTBD8Q5XKL5 378 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 UBE2J2Q8N2K1 259 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 TRPV3Q8NET8 790 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 OR13F1Q8NGS4 319 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 LRRC58Q96CX6 371 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 OSMRQ99650 979 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 GPR22Q99680 433 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 ZBED2Q9BTP6 218 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 BEX2Q9BXY8 128 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 IL22Q9GZX6 179 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 TMEM134Q9H6X4 195 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 LRRC4Q9HBW1 653 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 HMG20AQ9NP66 347 aa7.61□□□□□ -1.19
NEDD9-208ENST00000504387 MAP3K20Q9NYL2 800 aaKnown RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 RGS17Q9UGC6 210 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.61□□□□□ -1.19
NEDD9-208ENST00000504387 A0A0C4DFX4 3053 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 I6L893 689 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 UBXN8O00124 270 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 B4GALT4O60513 344 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 CYP7B1O75881 506 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 IPO13O94829 963 aaKnown RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 DIRAS1O95057 198 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 SEC24AO95486 1093 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 PIGRP01833 764 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 DNTTP04053 509 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 DBTP11182 482 aaKnown RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 IDO1P14902 403 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 CPB1P15086 417 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 SPNP16150 400 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 ATP5F1P24539 256 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 ATICP31939 592 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms