RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 TAGAPQ8N103 731 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 PPM1KQ8N3J5 372 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 CADM2Q8N3J6 435 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 LRRC20Q8TCA0 184 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 PIK3R3Q92569 461 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 KAT5Q92993 513 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 CCDC120Q96HB5 630 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 LRCH3Q96II8 777 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 LRGUKQ96M69 825 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 FAM161BQ96MY7 647 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 ZNF578Q96N58 590 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 FMO2Q99518 471 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 DOK1Q99704 481 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 CERS4Q9HA82 394 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 TRPS1Q9UHF7 1281 aa9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 AJAP1Q9UKB5 411 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 MRPS7Q9Y2R9 242 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-207ENST00000503974 A0A0G2JMP0 313 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 A0A0X1KG70 313 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 MYOCOSA0A1B0GUC4 107 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 STX16-NPEPL1H3BU86 382 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 H7C4K7 107 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 RPS17P08708 135 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 SRGAP2BP0DMP2 458 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 PBLDP30039 288 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 ACSL1P33121 698 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 SERPINB5P36952 375 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 RAP1GAPP47736 663 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 LHX1P48742 406 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 JAM2P57087 298 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 EEF1A1P68104 462 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 CREMQ03060 361 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 EEF1A2Q05639 463 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 GALNT2Q10471 571 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 MPP2Q14168 576 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 PGS1Q32NB8 556 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 EEF1A1P5Q5VTE0 462 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 C1orf146Q5VVC0 180 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 PM20D1Q6GTS8 502 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 OVOS1Q6IE37 1185 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 SLC8B1Q6J4K2 584 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 GJB7Q6PEY0 223 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 ARSKQ6UWY0 536 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 ANGPTL8Q6UXH0 198 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 SCARA5Q6ZMJ2 495 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 DSG4Q86SJ6 1040 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 MTDHQ86UE4 582 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 ZSWIM9Q86XI8 627 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 STX12Q86Y82 276 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 SCUBE3Q8IX30 993 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 EID3Q8N140 333 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 POU5F2Q8N7G0 328 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 OR6C4Q8NGE1 309 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 ZNF398Q8TD17 642 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 SHC3Q92529 594 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 B3GALT6Q96L58 329 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 TMEM68Q96MH6 324 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 GCNAQ96QF7 691 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 PKMYT1Q99640 499 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 TCF25Q9BQ70 676 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 ROPN1BQ9BZX4 212 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 GPR88Q9GZN0 384 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 RPF2Q9H7B2 306 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 ROPN1Q9HAT0 212 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 CYP4F11Q9HBI6 524 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 NGRNQ9NPE2 291 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 ZC4H2Q9NQZ6 224 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 CISHQ9NSE2 258 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 SYBUQ9NX95 663 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 MAT2BQ9NZL9 334 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 PHTF1Q9UMS5 762 aa9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 TIMM13Q9Y5L4 95 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-207ENST00000503974 TRAV20A0A0B4J274 112 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 HMX3A6NHT5 357 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 MEI4A8MW99 385 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 IFRD1O00458 451 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 CRTAMO95727 393 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 WEE2P0C1S8 567 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 NPR3P17342 541 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 CCNA2P20248 432 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 POU3F3P20264 500 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 GABRB3P28472 473 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 GP5P40197 560 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 ERFP50548 548 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 MFAP3P55082 362 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 CDH8P55286 799 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 YWHAEP62258 255 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 CSNK2BP67870 215 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 BNIP3Q12983 259 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 SLC29A2Q14542 456 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 PSMD5Q16401 504 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 ZBED5Q49AG3 693 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 ALG1LQ6GMV1 187 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 RGS9BPQ6ZS82 235 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 SLC16A12Q6ZSM3 486 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 FKBP9P1Q75LS8 142 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 RRAGAQ7L523 313 aa9.6□□□□□ -0.87
PDLIM5-207ENST00000503974 METTL23Q86XA0 190 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms