RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SYN1P17600 705 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 CTPS1P17812 591 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 FMO4P31512 558 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 CTSOP43234 321 aaPredicted RBP21.28■■□□□ 1
UBE2D3-216ENST00000503742 TTPAP49638 278 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 FUT11Q495W5 492 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 ASTLQ6HA08 431 aaPredicted RBP21.28■■□□□ 1
UBE2D3-216ENST00000503742 RINLQ6ZS11 566 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 LYSMD3Q7Z3D4 306 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 SLC22A9Q8IVM8 553 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 CCNYL1Q8N7R7 359 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 C19orf43Q9BQ61 176 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 CADM1Q9BY67 442 aaKnown RBP21.28■■□□□ 1
UBE2D3-216ENST00000503742 TAS2R1Q9NYW7 299 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 TAGLN3Q9UI15 199 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 A0A0J9YYE9 177 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 A8MUI8 341 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 TRBC1P01850 177 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 RB1P06400 928 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 GKP32189 559 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 PDAP1Q13442 181 aaKnown RBP21.28■■□□□ 1
UBE2D3-216ENST00000503742 ZNF77Q15935 545 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 SNCBQ16143 134 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 OR2AP1Q8NGE2 309 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 AGR3Q8TD06 166 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 ISG20Q96AZ6 181 aaKnown RBP21.28■■□□□ 1
UBE2D3-216ENST00000503742 GPR63Q9BZJ6 419 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 TNKS2Q9H2K2 1166 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 TAS2R13Q9NYV9 303 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 VTI1BQ9UEU0 232 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 PKP3Q9Y446 797 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 CHD7Q9P2D1 2997 aa21.28■■□□□ 1
UBE2D3-216ENST00000503742 SLCO1B7G3V0H7 640 aa21.27■■□□□ 1
UBE2D3-216ENST00000503742 SRP72O76094 671 aaKnown RBP21.27■■□□□ 1
UBE2D3-216ENST00000503742 RHOBTB1O94844 696 aa21.27■■□□□ 1
UBE2D3-216ENST00000503742 BMP1P13497 986 aa21.27■■□□□ 1
UBE2D3-216ENST00000503742 CD9P21926 228 aa21.27■■□□□ 1
UBE2D3-216ENST00000503742 NTHL1P78549 312 aa21.27■■□□□ 1
UBE2D3-216ENST00000503742 NFKB2Q00653 900 aa21.27■■□□□ 1
UBE2D3-216ENST00000503742 SEL1L3Q68CR1 1132 aa21.27■■□□□ 1
UBE2D3-216ENST00000503742 KDM1BQ8NB78 822 aa21.27■■□□□ 1
UBE2D3-216ENST00000503742 RPL10LQ96L21 214 aaKnown RBP21.27■■□□□ 1
UBE2D3-216ENST00000503742 ATP13A3Q9H7F0 1226 aa21.27■■□□□ 1
UBE2D3-216ENST00000503742 CYP4F12Q9HCS2 524 aa21.27■■□□□ 1
UBE2D3-216ENST00000503742 F8W8V4 182 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 GSC2O15499 205 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 XYLBO75191 536 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 MYOGP15173 224 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 STK19P49842 368 aaPredicted RBP21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 CDKN3Q16667 212 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 PTPRNQ16849 979 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 ZRANB3Q5FWF4 1079 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 METTL21CQ5VZV1 264 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 RHEBL1Q8TAI7 183 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 IRF7Q92985 503 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 CCDC68Q9H2F9 335 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 MTIF3Q9H2K0 278 aaKnown RBP21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 SYTL2Q9HCH5 934 aa21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 OAS3Q9Y6K5 1087 aaKnown RBP21.27■□□□□ 0.99
UBE2D3-216ENST00000503742 SCN8AQ9UQD0 1980 aa21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 H3BMM5 538 aa21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 PFDN6O15212 129 aa21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 GYG2O15488 501 aa21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 HSPA1AP0DMV8 641 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 HSPA1BP0DMV9 641 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 PKMP14618 531 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 TCF3P15923 654 aa21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 SP100P23497 879 aaPredicted RBP21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 ADARP55265 1226 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 AARS2Q5JTZ9 985 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 PAQR3Q6TCH7 311 aa21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 TEX9Q8N6V9 391 aa21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 OR52B2Q96RD2 323 aa21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 TFB2MQ9H5Q4 396 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-216ENST00000503742 OR1I1O60431 355 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 IMPDH1P20839 514 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 SNRPD1P62314 119 aaKnown RBP21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 CACNG1Q06432 222 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 GALNT1Q10472 559 aaPredicted RBP21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 CTSL3PQ5NE16 218 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 C22orf39Q6P5X5 142 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 FAM13CQ8NE31 585 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 L3HYPDHQ96EM0 354 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 ZSWIM3Q96MP5 696 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 BBS2Q9BXC9 721 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 SHCBP1LQ9BZQ2 653 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 DERL2Q9GZP9 239 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 LINC00597Q9H2U6 94 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 TCF7L2Q9NQB0 619 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 SPHK2Q9NRA0 654 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 TBC1D14Q9P2M4 693 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 BAIAP2L1Q9UHR4 511 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 FAM50BQ9Y247 325 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 ZNF106Q9H2Y7 1883 aaKnown RBP21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 NEDD8-MDP1E9PL57 170 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 POU2F2P09086 479 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 HNF1BP35680 557 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 CPA2P48052 419 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 OR4D1Q15615 310 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 GRASPQ7Z6J2 395 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms