RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 GOLGA6CA6NDK9 693 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 GOLGA6BA6NDN3 693 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 NEMP2A6NFY4 417 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 TMEM202A6NGA9 273 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 SCAMP1O15126 338 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 RASGRP1O95267 797 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 METTL18O95568 372 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 AGTP01019 485 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 ATP1A1P05023 1023 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 GOLGA6DP0CG33 693 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 GIMD1P0DJR0 217 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 HK3P52790 923 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 DCDC1P59894 354 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 SRP54P61011 504 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 SIM1P81133 766 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 HENMT1Q5T8I9 393 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 N4BP2L1Q5TBK1 243 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 FAXCQ5TGI0 409 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 RBFAQ8N0V3 343 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 TSACCQ96A04 125 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 AGAP2Q99490 1192 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 RIOK2Q9BVS4 552 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 SLC13A1Q9BZW2 595 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 TCEAL2Q9H3H9 227 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 RAD18Q9NS91 495 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 GOLGA6AQ9NYA3 693 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 SPASTQ9UBP0 616 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 KLQ9UEF7 1012 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 TTC7AQ9ULT0 858 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 DGKBQ9Y6T7 804 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 CACNA1AO00555 2505 aa18.16■□□□□ 0.5
PDLIM7-209ENST00000503346 CABIN1Q9Y6J0 2220 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 AURKAO14965 403 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 AQP9O43315 295 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 TNFSF14O43557 240 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 HMGCLP35914 325 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 SNX1Q13596 522 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 KCTD11Q693B1 232 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 TTC30BQ8N4P2 665 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 OR4C6Q8NH72 309 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 OR1E3Q8WZA6 343 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 LRRC45Q96CN5 670 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 PDXPQ96GD0 296 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 LRRC61Q9BV99 259 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 FRMD8Q9BZ67 464 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 FGF22Q9HCT0 170 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 HOMER3Q9NSC5 361 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 NLGN3Q9NZ94 848 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 FTSJ1Q9UET6 329 aa18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 DRG1Q9Y295 367 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-209ENST00000503346 TRIM38O00635 465 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 LDOC1O95751 146 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 TNFP01375 233 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 ADRB1P08588 477 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 PRRT3Q5FWE3 981 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 KCTD16Q68DU8 428 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 NYAP1Q6ZVC0 841 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 HID1Q8IV36 788 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 PRELID2Q8N945 189 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 BLOC1S5Q8TDH9 187 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 LMX1AQ8TE12 382 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 COX14Q96I36 57 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 CNDP2Q96KP4 475 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 TBL1YQ9BQ87 522 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 DUSP23Q9BVJ7 150 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 ARNT2Q9HBZ2 717 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 FEZ2Q9UHY8 353 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 SNX12Q9UMY4 172 aa18.14■□□□□ 0.49
PDLIM7-209ENST00000503346 TP53BP1Q12888 1972 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 MED19A0JLT2 244 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 CES2O00748 559 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 TPP1O14773 563 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 FFAR2O15552 330 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 PSMD3O43242 534 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 SIGLEC6O43699 453 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 IFNB1P01574 187 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 SLC4A1P02730 911 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 CEACAM5P06731 702 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 ALPPL2P10696 532 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 BPIP17213 487 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 FOXK2Q01167 660 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 MSLNQ13421 630 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 OLIG2Q13516 323 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 PROX2Q3B8N5 592 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 DENND5AQ6IQ26 1287 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 GLT6D1Q7Z4J2 308 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 SDR16C5Q8N3Y7 309 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 FSTL5Q8N475 847 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 TRAM1L1Q8N609 369 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 GPR26Q8NDV2 337 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 HIC2Q96JB3 615 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 PLEKHG4BQ96PX9 1271 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 OSBPL9Q96SU4 736 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 APOL2Q9BQE5 337 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 CLPBQ9H078 707 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 LRRC40Q9H9A6 602 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 TOR4AQ9NXH8 423 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 IL17CQ9P0M4 197 aa18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 CNOT6Q9ULM6 557 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 SLC17A4Q9Y2C5 497 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms