RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 Q8NA96 180 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 RNF169Q8NCN4 708 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 PSPC1Q8WXF1 523 aaKnown RBP4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 RAB40AQ8WXH6 277 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 NPIPB3Q92617 1050 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 GTF3C6Q969F1 213 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 TUBGCP3Q96CW5 907 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 HDAC11Q96DB2 347 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 MRPL38Q96DV4 380 aaKnown RBP4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 FBXL20Q96IG2 436 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZNF512Q96ME7 567 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 HS6ST2Q96MM7 605 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 OR14A2Q96R54 314 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 PARK7Q99497 189 aaKnown RBP4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 SMOQ99835 787 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 MRPL1Q9BYD6 325 aaKnown RBP4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 MTMR12Q9C0I1 747 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 GPR88Q9GZN0 384 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 PLK3Q9H4B4 646 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 RPAP3Q9H6T3 665 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 TM9SF3Q9HD45 589 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 C20orf141Q9NUB4 165 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 OLAHQ9NV23 265 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 FBXO28Q9NVF7 368 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 BABAM1Q9NWV8 329 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 P4HTMQ9NXG6 502 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 ETAA1Q9NY74 926 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 GDE1Q9NZC3 331 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 HDAC6Q9UBN7 1215 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 KLQ9UEF7 1012 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 CDH7Q9ULB5 785 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 PLAGL1Q9UM63 463 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 JRKLQ9Y4A0 524 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 TEX264Q9Y6I9 313 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 IL16Q14005 1332 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM205AQ6ZU69 1335 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 KIAA1551Q9HCM1 1747 aa4.38□□□□□ -1.71
HMGB1P21-201ENST00000502313 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 NPIPB6E9PJ23 425 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLC33A1O00400 549 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 POLRMTO00411 1230 aaKnown RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 TRIM24O15164 1050 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 NKX2-8O15522 239 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 HS6ST1O60243 411 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 PRDM1O75626 825 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 AKR7A3O95154 331 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 KAT7O95251 611 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM58BPP0C7Q3 252 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ATXN1LP0C7T5 689 aaKnown RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 CCNCP24863 283 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ADORA2AP29274 412 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 LRPAP1P30533 357 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 PXNP49023 591 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 KHKP50053 298 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 PNLIPRP2P54317 469 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 F2RL1P55085 397 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 FOXL2P58012 376 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 PRKCEQ02156 737 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 DEUP1Q05D60 604 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 GFPT1Q06210 699 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 MTAPQ13126 283 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 PPIGQ13427 754 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 RIPK1Q13546 671 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ACOX1Q15067 660 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 PGM5Q15124 567 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ELAVL1Q15717 326 aaKnown RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 SGCBQ16585 318 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 TAZQ16635 292 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 BMT2Q1RMZ1 405 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 AP5B1Q2VPB7 878 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 TWISTNBQ3B726 338 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 PREPLQ4J6C6 727 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 FBLN7Q53RD9 439 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM171A1Q5VUB5 890 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ANKS6Q68DC2 871 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 HEPHL1Q6MZM0 1159 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 HMBOX1Q6NT76 420 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZNF530Q6P9A1 599 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 FOXR2Q6PJQ5 311 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 GLDNQ6ZMI3 551 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ARMCX2Q7L311 632 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 MIER3Q7Z3K6 550 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ADGRE4PQ86SQ3 457 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ABRAQ8N0Z2 381 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 BANPQ8N9N5 519 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 RBM15BQ8NDT2 890 aaKnown RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 DBF4BQ8NFT6 615 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 GRAPLQ8TC17 118 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 NOC3LQ8WTT2 800 aaKnown RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLC5A11Q8WWX8 675 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 DACT3Q96B18 629 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZNF668Q96K58 619 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZNF558Q96NG5 402 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 POLR3CQ9BUI4 534 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 IFIH1Q9BYX4 1025 aaKnown RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 SMOC2Q9H3U7 446 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 SERHL2Q9H4I8 314 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 COQ10BQ9H8M1 238 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms